RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 ITGB1P05556 798 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 RSPH10BP0C881 870 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 ZNF200P98182 395 aaPredicted RBP19.3■□□□□ 0.68
SF3B4-202ENST00000457312 C7orf31Q8N865 590 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 ATP8B4Q8TF62 1192 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 SH2B1Q9NRF2 756 aaPredicted RBP19.3■□□□□ 0.68
SF3B4-202ENST00000457312 TCRBV5S4A2TA0A5A2 114 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 TXNP10599 105 aaKnown RBP19.29■□□□□ 0.68
SF3B4-202ENST00000457312 PDE4BQ07343 736 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 SLC9C2Q5TAH2 1124 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 P2RX5Q93086 422 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 ATP8A2Q9NTI2 1148 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 KIAA1217Q5T5P2 1943 aa19.29■□□□□ 0.68
SF3B4-202ENST00000457312 TMEM232C9JQI7 657 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 GNAI3P08754 354 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 STAT2P52630 851 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 HIC1Q14526 733 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 GMCL1P1Q8NEA9 526 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 SPPL3Q8TCT6 385 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 ALG1Q9BT22 464 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 CCDC8Q9H0W5 538 aaPredicted RBP19.28■□□□□ 0.68
SF3B4-202ENST00000457312 S1PR5Q9H228 398 aa19.28■□□□□ 0.68
SF3B4-202ENST00000457312 IGKV6D-41A0A0C4DH26 115 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 BMP3P12645 472 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 NPR3P17342 541 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 RASA1P20936 1047 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 THPOP40225 353 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 PSEN2P49810 448 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.68
SF3B4-202ENST00000457312 AMOTL1Q8IY63 956 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 NEK1Q96PY6 1258 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 TSHZ2Q9NRE2 1034 aa19.27■□□□□ 0.68
SF3B4-202ENST00000457312 FRYQ5TBA9 3013 aa19.27■□□□□ 0.67
SF3B4-202ENST00000457312 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 CEP295Q9C0D2 2601 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 SDHBP21912 280 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 EDNRBP24530 442 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 SNAP25P60880 206 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 CRIPAKQ8N1N5 446 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 NR2E1Q9Y466 385 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 SPEGQ15772 3267 aa19.26■□□□□ 0.67
SF3B4-202ENST00000457312 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 CNOT1A5YKK6 2376 aaKnown RBP19.25■□□□□ 0.67
SF3B4-202ENST00000457312 HAS3O00219 553 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 MBD4O95243 580 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 ASGR2P07307 311 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 ARHGAP1Q07960 439 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 PDE4DQ08499 809 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 MFSD10Q14728 455 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 SERINC5Q86VE9 423 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 POF1BQ8WVV4 589 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 ZNF689Q96CS4 500 aaPredicted RBP19.25■□□□□ 0.67
SF3B4-202ENST00000457312 TLE6Q9H808 572 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 SYNPO2Q9UMS6 1093 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 MYH7P12883 1935 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 ZZEF1O43149 2961 aa19.25■□□□□ 0.67
SF3B4-202ENST00000457312 DCDC2BA2VCK2 349 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 PER2O15055 1255 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 F2P00734 622 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 CASTP20810 708 aaKnown RBP19.24■□□□□ 0.67
SF3B4-202ENST00000457312 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
SF3B4-202ENST00000457312 BTG3Q14201 252 aaPredicted RBP19.24■□□□□ 0.67
SF3B4-202ENST00000457312 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 SLFN13Q68D06 897 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 SLC30A10Q6XR72 485 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 FAM160B2Q86V87 743 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 MKL1Q969V6 931 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 EAF2Q96CJ1 260 aaPredicted RBP19.24■□□□□ 0.67
SF3B4-202ENST00000457312 RTP3Q9BQQ7 232 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 KATNAL1Q9BW62 490 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 CDH22Q9UJ99 828 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 CCPG1Q9ULG6 757 aa19.24■□□□□ 0.67
SF3B4-202ENST00000457312 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
SF3B4-202ENST00000457312 NFIBO00712 420 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 ZNF286BP0CG31 522 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 NAALADL2Q58DX5 795 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 CCDC62Q6P9F0 684 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 SYCE2Q6PIF2 218 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 APOL5Q9BWW9 433 aa19.23■□□□□ 0.67
SF3B4-202ENST00000457312 CDV3Q9UKY7 258 aaKnown RBP19.23■□□□□ 0.67
SF3B4-202ENST00000457312 MRPL42Q9Y6G3 142 aaKnown RBP19.23■□□□□ 0.67
SF3B4-202ENST00000457312 IKQ13123 557 aaPredicted RBP19.22■□□□□ 0.67
SF3B4-202ENST00000457312 DGKDQ16760 1214 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 DUSP6Q16828 381 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 ANKRD54Q6NXT1 300 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 ZC3H14Q6PJT7 736 aaKnown RBP19.22■□□□□ 0.67
SF3B4-202ENST00000457312 SUMF1Q8NBK3 374 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 CHURC1Q8WUH1 139 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 RIN2Q8WYP3 895 aaPredicted RBP19.22■□□□□ 0.67
SF3B4-202ENST00000457312 APBB2Q92870 758 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 CEP95Q96GE4 821 aa19.22■□□□□ 0.67
SF3B4-202ENST00000457312 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
SF3B4-202ENST00000457312 MAST4O15021 2626 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms