RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 EEF2P13639 858 aaKnown RBP15.02□□□□□ -0.01
TOP3B-213ENST00000457179 SHMT1P34896 483 aa15.02□□□□□ -0.01
TOP3B-213ENST00000457179 CDR1P51861 262 aa15.02□□□□□ -0.01
TOP3B-213ENST00000457179 CLNS1AP54105 237 aaKnown RBP15.02□□□□□ -0.01
TOP3B-213ENST00000457179 B4GALNT4Q76KP1 1039 aa15.02□□□□□ -0.01
TOP3B-213ENST00000457179 CNKSR1Q969H4 720 aa15.02□□□□□ -0.01
TOP3B-213ENST00000457179 DPEP1P16444 411 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 MATR3P43243 847 aaKnown RBP eCLIP15.01□□□□□ -0.019e-6■■□□□ 12
TOP3B-213ENST00000457179 CENPFP49454 3210 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 REXO1Q8N1G1 1221 aaKnown RBP15.01□□□□□ -0.01
TOP3B-213ENST00000457179 DOCK2Q92608 1830 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 ARL8AQ96BM9 186 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 FAXDC2Q96IV6 333 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 BRWD3Q6RI45 1802 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 SBF2Q86WG5 1849 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 GH2P01242 217 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-213ENST00000457179 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 DACT2Q5SW24 774 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 OGFOD1Q8N543 542 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 SPATA20Q8TB22 786 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 C6orf50Q9HD87 102 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 SAR1BQ9Y6B6 198 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 MYH6P13533 1939 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 RPSAP08865 295 aaKnown RBP15.01□□□□□ -0.01
TOP3B-213ENST00000457179 SH3RF1Q7Z6J0 888 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 CNGA4Q8IV77 575 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 ADGRF4Q8IZF3 695 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 FAM163AQ96GL9 167 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-213ENST00000457179 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
TOP3B-213ENST00000457179 TIAM2Q8IVF5 1701 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 ARAP2Q8WZ64 1704 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 IFT88Q13099 833 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 NAA25Q14CX7 972 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 KRT31Q15323 416 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 HPS3Q969F9 1004 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 GSDMAQ96QA5 445 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 RNF225M0QZC1 329 aaPredicted RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 TDP2O95551 362 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 GCFC2P16383 781 aaKnown RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC40Q4G0X9 1142 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 PREPLQ4J6C6 727 aaPredicted RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 CCNI2Q6ZMN8 369 aaPredicted RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 APTXQ7Z2E3 356 aaKnown RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 TTLL6Q8N841 843 aa15□□□□□ -0.01
TOP3B-213ENST00000457179 BCCIPQ9P287 314 aaKnown RBP eCLIP15□□□□□ -0.01
TOP3B-213ENST00000457179 ADD3Q9UEY8 706 aaKnown RBP15□□□□□ -0.01
TOP3B-213ENST00000457179 FSBPO95073 299 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 PRCPP42785 496 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 ICA1Q05084 483 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 NONOQ15233 471 aaKnown RBP eCLIP14.99□□□□□ -0.01
TOP3B-213ENST00000457179 TRAPPC11Q7Z392 1133 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 CHP1Q99653 195 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
TOP3B-213ENST00000457179 MYH8P13535 1937 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 ATP2C2O75185 946 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 BMP15O95972 392 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 GUCY1A3Q02108 690 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 PAK1Q13153 545 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 STRIP1Q5VSL9 837 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 SLC30A10Q6XR72 485 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 SH3BP5LQ7L8J4 393 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 JADE2Q9NQC1 790 aa14.99□□□□□ -0.01
TOP3B-213ENST00000457179 POTEMA6NI47 508 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
TOP3B-213ENST00000457179 GNA11P29992 359 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 PDXDC2PQ6P474 469 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 TMTC1Q8IUR5 882 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 JAKMIP2Q96AA8 810 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
TOP3B-213ENST00000457179 PSMD14O00487 310 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 ECE1P42892 770 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 SEC24CP53992 1094 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC122Q5T0U0 273 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 DYMQ7RTS9 669 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC13Q8IYE1 715 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 HDAC7Q8WUI4 952 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 ABHD10Q9NUJ1 306 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 PI4KBQ9UBF8 816 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 UBR3Q6ZT12 1888 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 SNED1Q8TER0 1413 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 PPP1R12BO60237 982 aaPredicted RBP14.98□□□□□ -0.01
TOP3B-213ENST00000457179 IDEP14735 1019 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 KRT9P35527 623 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 UBXN2AP68543 259 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 SARNPP82979 210 aaKnown RBP14.98□□□□□ -0.01
TOP3B-213ENST00000457179 APBA1Q02410 837 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 UBXN1Q04323 297 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 TTMPQ5BVD1 217 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CYP26C1Q6V0L0 522 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC114Q96M63 670 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 TMEM39BQ9GZU3 492 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms