RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 AP1M1Q9BXS5 423 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 BAIAP2L1Q9UHR4 511 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 FBXL5Q9UKA1 691 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 FLT1P17948 1338 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
CLIP4-208ENST00000456385 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 ERVV-2B6SEH9 535 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 F8W031 263 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 CLSTN1O94985 981 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 ADRA2BP18089 450 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 GBP2P32456 591 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 ELF3P78545 371 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 KCNMA1Q12791 1236 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 NAB2Q15742 525 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 GKAP1Q5VSY0 366 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 CENPPQ6IPU0 288 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 HIBCHQ6NVY1 386 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 LRIG3Q6UXM1 1119 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 CPLX4Q7Z7G2 160 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 CCDC50Q8IVM0 306 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 ATP6V0A4Q9HBG4 840 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 PCDHA4Q9UN74 947 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 BCORQ6W2J9 1755 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 C5orf60A6NFR6 353 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 KCNK3O14649 394 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TNNC1P63316 161 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 MAN2A1Q16706 1144 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 SLC4A8Q2Y0W8 1093 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 LACTB2Q53H82 288 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 STAG2Q8N3U4 1231 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TANGO6Q9C0B7 1094 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TMEM59LQ9UK28 342 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
CLIP4-208ENST00000456385 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-208ENST00000456385 A0A087X0T9 212 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 SSU72P8A0A1W2PR75 194 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 WTIPA6NIX2 430 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-208ENST00000456385 USP17L12C9JPN9 530 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 USP17L21D6R901 530 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 PPP1R12AO14974 1030 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-208ENST00000456385 PDE8AO60658 829 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 FAM228BP0C875 321 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 DRD4P21917 467 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 SLC8A1P32418 973 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 PPP1R7Q15435 360 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 KIAA0753Q2KHM9 967 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 MSL1Q68DK7 614 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 C3orf20Q8ND61 904 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 STAMBPL1Q96FJ0 436 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
CLIP4-208ENST00000456385 C7orf25Q9BPX7 421 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 DDX47Q9H0S4 455 aaKnown RBP11.33□□□□□ -0.6
CLIP4-208ENST00000456385 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 PCDHGC5Q9Y5F6 944 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
CLIP4-208ENST00000456385 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 M0R2N6 131 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 NOL4O94818 638 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 CALML3P27482 149 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 BIRC3Q13489 604 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 DYMQ7RTS9 669 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 CCDC47Q96A33 483 aaKnown RBP11.32□□□□□ -0.6
CLIP4-208ENST00000456385 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
CLIP4-208ENST00000456385 DAPK3O43293 454 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 ORC4O43929 436 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 DNAJC8O75937 253 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-208ENST00000456385 PAEPP09466 180 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 TECP42680 631 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 CCNHP51946 323 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-208ENST00000456385 LRRC41Q15345 812 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 SLC9C1Q4G0N8 1177 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 TCP11Q8WWU5 503 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 LRRC45Q96CN5 670 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
CLIP4-208ENST00000456385 CEP104O60308 925 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms