RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 SLF1Q9BQI6 1058 aa11.15□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CABP5Q9NP86 173 aa11.15□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LUC7L2Q9Y383 392 aaKnown RBP11.15□□□□□ -0.62
CHCHD4P3-201ENST00000455954 REXO2Q9Y3B8 237 aaKnown RBP11.15□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MAST2Q6P0Q8 1798 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 A0A1W2PQJ5 194 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SPDYE5A6NIY4 337 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GSG1L2A8MUP6 293 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZEB2O60315 1214 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DDAH1O94760 285 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MBD4O95243 580 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 BAG3O95817 575 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PLCG2P16885 1265 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GJA5P36382 358 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 LONP1P36776 959 aaKnown RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 AFMP43652 599 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 STX17P56962 302 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 HERVK_113P62684 666 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NR5A1Q13285 461 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PICALMQ13492 652 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SEC23AQ15436 765 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ALS2CLQ60I27 953 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 USP49Q70CQ1 688 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ERO1BQ86YB8 467 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FAM114A1Q8IWE2 563 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ESR2Q92731 530 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TACO1Q9BSH4 297 aaKnown RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 UBAC1Q9BSL1 405 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DDX4Q9NQI0 724 aaKnown RBP11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
CHCHD4P3-201ENST00000455954 A0A0U1RQJ8 604 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EBAG9O00559 213 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GTF2A2P52657 109 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PPP4CP60510 307 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FUT2Q10981 343 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCDC122Q5T0U0 273 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EMBQ6PCB8 327 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 KIAA1328Q86T90 577 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ATRIPQ8WXE1 791 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NCAPGQ9BPX3 1015 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CUEDC2Q9H467 287 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SUGCTQ9HAC7 445 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TAB2Q9NYJ8 693 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GOLGA6BA6NDN3 693 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DDTLA6NHG4 134 aaPredicted RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 INPP5BP32019 993 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TDO2P48775 406 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 VAV2P52735 878 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EPHB4P54760 987 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZBED6P86452 979 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 UBXN1Q04323 297 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CTDSPL2Q05D32 466 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PPATQ06203 517 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PKN1Q16512 942 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 COBLL1Q53SF7 1204 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EMC10Q5UCC4 262 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCDC91Q7Z6B0 441 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ADGRA1Q86SQ6 560 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TRIM58Q8NG06 486 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms