RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MTG1Q9BT17 334 aaPredicted RBP19.9■□□□□ 0.78
USP39-208ENST00000455732 NCOA5Q9HCD5 579 aaKnown RBP19.9■□□□□ 0.78
USP39-208ENST00000455732 ESYT2A0FGR8 921 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 KPNA6O60684 536 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 ICAM3P32942 547 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 ADCY7P51828 1080 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 EPHB4P54760 987 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 CCT2P78371 535 aaKnown RBP19.89■□□□□ 0.77
USP39-208ENST00000455732 ANKRD1Q15327 319 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 UBE2SQ16763 222 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 GNPTABQ3T906 1256 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 CCDC12Q8WUD4 166 aaPredicted RBP19.89■□□□□ 0.77
USP39-208ENST00000455732 PHKBQ93100 1093 aa19.89■□□□□ 0.77
USP39-208ENST00000455732 TRIP12Q14669 1992 aaPredicted RBP19.88■□□□□ 0.77
USP39-208ENST00000455732 SPDYE3A6NKU9 549 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 B4GALT4O60513 344 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 AKAP17AQ02040 695 aaKnown RBP19.88■□□□□ 0.77
USP39-208ENST00000455732 FPGSQ05932 587 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 MFSD5Q6N075 450 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 AFG1LQ8WV93 481 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 TRPV6Q9H1D0 765 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 EHMT1Q9H9B1 1298 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 PCDHA6Q9UN73 950 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 PCDHA8Q9Y5H6 950 aa19.88■□□□□ 0.77
USP39-208ENST00000455732 SMCO2A6NFE2 343 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 FOSP01100 380 aaPredicted RBP19.87■□□□□ 0.77
USP39-208ENST00000455732 MMP3P08254 477 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 UBA1P22314 1058 aaKnown RBP19.87■□□□□ 0.77
USP39-208ENST00000455732 CLK2P49760 499 aaKnown RBP19.87■□□□□ 0.77
USP39-208ENST00000455732 AP3B2Q13367 1082 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 LAMC2Q13753 1193 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 DEFB123Q8N688 67 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 LARP6Q9BRS8 491 aaKnown RBP19.87■□□□□ 0.77
USP39-208ENST00000455732 SLC26A6Q9BXS9 759 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 ZMYND12Q9H0C1 365 aa19.87■□□□□ 0.77
USP39-208ENST00000455732 SPATA31C2B4DYI2 1134 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 CPLX1O14810 134 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 FIBPO43427 364 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 HOXD8P13378 290 aaPredicted RBP19.86■□□□□ 0.77
USP39-208ENST00000455732 AK2P54819 239 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 NBPF20Q3BBV1 942 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 CELF3Q5SZQ8 465 aaKnown RBP19.86■□□□□ 0.77
USP39-208ENST00000455732 CPLX2Q6PUV4 134 aaKnown RBP19.86■□□□□ 0.77
USP39-208ENST00000455732 TRIM22Q8IYM9 498 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 PPTC7Q8NI37 304 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 ZFP91Q96JP5 570 aaPredicted RBP19.86■□□□□ 0.77
USP39-208ENST00000455732 PPP1R12CQ9BZL4 782 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 TPCN1Q9ULQ1 816 aa19.86■□□□□ 0.77
USP39-208ENST00000455732 PFKFB2O60825 505 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 SP2Q02086 613 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 SCRN1Q12765 414 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 STK3Q13188 491 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 SEMA3FQ13275 785 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 MYSM1Q5VVJ2 828 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 NFRKBQ6P4R8 1299 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 DHX37Q8IY37 1157 aaKnown RBP19.85■□□□□ 0.77
USP39-208ENST00000455732 SLC17A8Q8NDX2 589 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 CCDC148Q8NFR7 591 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 GPRASP2Q96D09 838 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 NOC4LQ9BVI4 516 aaKnown RBP19.85■□□□□ 0.77
USP39-208ENST00000455732 ANO3Q9BYT9 981 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
USP39-208ENST00000455732 SH3GLB2Q9NR46 395 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 SCN5AQ14524 2016 aa19.85■□□□□ 0.77
USP39-208ENST00000455732 UMODL1Q5DID0 1318 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 GGPS1O95749 300 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 CYP2C18P33260 490 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
USP39-208ENST00000455732 MCTP2Q6DN12 878 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 Q7L0L9 218 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 C16orf59Q7L2K0 433 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 NLRX1Q86UT6 975 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 FAM177A1Q8N128 213 aaPredicted RBP19.84■□□□□ 0.77
USP39-208ENST00000455732 KAT2BQ92831 832 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 CDHR1Q96JP9 859 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 SENP7Q9BQF6 1050 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 HIPK3Q9H422 1215 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 C6orf50Q9HD87 102 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 TRMT13Q9NUP7 481 aaKnown RBP19.84■□□□□ 0.77
USP39-208ENST00000455732 RTEL1Q9NZ71 1219 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 UBIAD1Q9Y5Z9 338 aa19.84■□□□□ 0.77
USP39-208ENST00000455732 CDKL5O76039 1030 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 DEXIO95424 95 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 CSF2RAP15509 400 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 GNA11P29992 359 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 SREBF1P36956 1147 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 NEK4P51957 841 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 PTPN11Q06124 597 aaPredicted RBP19.83■□□□□ 0.77
USP39-208ENST00000455732 PPIGQ13427 754 aaKnown RBP eCLIP19.83■□□□□ 0.776e-7■■■□□ 16
USP39-208ENST00000455732 NEDD9Q14511 834 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 DGKDQ16760 1214 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 METTL7BQ6UX53 244 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 TMEM199Q8N511 208 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 PPP1R13LQ8WUF5 828 aa19.83■□□□□ 0.77
USP39-208ENST00000455732 TANC1Q9C0D5 1861 aa19.83■□□□□ 0.76
USP39-208ENST00000455732 STK36Q9NRP7 1315 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 PPFIA3O75145 1194 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 SUPT20HL2P0C7V6 817 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 ITGB5P18084 799 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms