RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CSPG5O95196 566 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 F2P00734 622 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 THPOP40225 353 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 HTRA4P83105 476 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-204ENST00000454850 HIC1Q14526 733 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 HFE2Q6ZVN8 426 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-204ENST00000454850 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
CLCN4-204ENST00000454850 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 TCP11L1Q9NUJ3 509 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 DDX41Q9UJV9 622 aaKnown RBP11.59□□□□□ -0.55
CLCN4-204ENST00000454850 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 FAM50BQ9Y247 325 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 MRVI1Q9Y6F6 885 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 ABCB11O95342 1321 aa11.59□□□□□ -0.55
CLCN4-204ENST00000454850 LOXHD1Q8IVV2 1947 aa11.58□□□□□ -0.55
CLCN4-204ENST00000454850 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 HAS3O00219 553 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 DHX16O60231 1041 aaKnown RBP11.58□□□□□ -0.56
CLCN4-204ENST00000454850 FGAP02671 866 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 CTSHP09668 335 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 FGRP09769 529 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 SNHG28P0DPA3 235 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 MX1P20591 662 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 RPAINQ86UA6 219 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 PPTC7Q8NI37 304 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 IWS1Q96ST2 819 aa11.58□□□□□ -0.56
CLCN4-204ENST00000454850 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
CLCN4-204ENST00000454850 ZFHX2Q9C0A1 2572 aaPredicted RBP11.58□□□□□ -0.56
CLCN4-204ENST00000454850 CACNA1HO95180 2353 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 H3BNC9 293 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 MYCLP12524 364 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-204ENST00000454850 CTNNB1P35222 781 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 IRS1P35568 1242 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 LAMC2Q13753 1193 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 ALX1Q15699 326 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
CLCN4-204ENST00000454850 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 ADGRF4Q8IZF3 695 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 SEPT8Q92599 483 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 EMID1Q96A84 441 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-204ENST00000454850 FAM227BQ96M60 508 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 SPATA33Q96N06 139 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 MUTYHQ9UIF7 546 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 KMT2EQ8IZD2 1858 aa11.57□□□□□ -0.56
CLCN4-204ENST00000454850 COL4A6Q14031 1691 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 A0A0D9SFI3 127 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 C17orf102A2RUQ5 167 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
CLCN4-204ENST00000454850 GGPS1O95749 300 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 CFBP00751 764 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 NR3C2P08235 984 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
CLCN4-204ENST00000454850 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 HSDL1Q3SXM5 330 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 PLEKHG4Q58EX7 1191 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 MFSD6Q6ZSS7 791 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 SERINC5Q86VE9 423 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 TBC1D10CQ8IV04 446 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 ATP6V0A1Q93050 837 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 TTC14Q96N46 770 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 IFIH1Q9BYX4 1025 aaKnown RBP11.56□□□□□ -0.56
CLCN4-204ENST00000454850 OSBPL7Q9BZF2 842 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
CLCN4-204ENST00000454850 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 WDR87Q6ZQQ6 2873 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 NEDD4P46934 1319 aa11.56□□□□□ -0.56
CLCN4-204ENST00000454850 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
CLCN4-204ENST00000454850 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 TOP1MTQ969P6 601 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
CLCN4-204ENST00000454850 SNX27Q96L92 541 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 IGFLR1Q9H665 355 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 HELLSQ9NRZ9 838 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 MRPL11Q9Y3B7 192 aaKnown RBP11.55□□□□□ -0.56
CLCN4-204ENST00000454850 TTC3P53804 2025 aa11.55□□□□□ -0.56
CLCN4-204ENST00000454850 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 TREHO43280 583 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 RGS20O76081 388 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 LTBRP36941 435 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 DLX2Q07687 328 aaPredicted RBP11.54□□□□□ -0.56
CLCN4-204ENST00000454850 HYAL1Q12794 435 aa11.54□□□□□ -0.56
CLCN4-204ENST00000454850 COL19A1Q14993 1142 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms