RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 FAM204AQ9H8W3 233 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 CETN3O15182 167 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 NEBLO76041 1014 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
DDR1-240ENST00000454612 ZNF384Q8TF68 577 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 PCIF1Q9H4Z3 704 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
DDR1-240ENST00000454612 ADAM21Q9UKJ8 722 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 CCNE1P24864 410 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 NFIAQ12857 509 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 CASP8Q14790 479 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 RPAINQ86UA6 219 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 FAM53CQ9NYF3 392 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 GUCY2DQ02846 1103 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 ICA1Q05084 483 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
DDR1-240ENST00000454612 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
DDR1-240ENST00000454612 MRRFQ96E11 262 aaKnown RBP12.32□□□□□ -0.44
DDR1-240ENST00000454612 PANX2Q96RD6 677 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
DDR1-240ENST00000454612 SLC37A4O43826 429 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 NR2F2P24468 414 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 DEFB132Q7Z7B7 95 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 ZNF512BQ96KM6 892 aaPredicted RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 BTAF1O14981 1849 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MYMKA6NI61 221 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 ACTN1P12814 892 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 KRT12Q99456 494 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 HSF2BPO75031 334 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 SASH3O75995 380 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 TUBB4AP04350 444 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MYO1AQ9UBC5 1043 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 KIF11P52732 1056 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 UBLCP1Q8WVY7 318 aaPredicted RBP12.31□□□□□ -0.44
DDR1-240ENST00000454612 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 FHOD1Q9Y613 1164 aa12.31□□□□□ -0.44
DDR1-240ENST00000454612 MMP10P09238 476 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 MTRQ99707 1265 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
DDR1-240ENST00000454612 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 BACH1O14867 736 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
DDR1-240ENST00000454612 LIG3P49916 1009 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 OGFOD1Q8N543 542 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
DDR1-240ENST00000454612 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 CCDC169A6NNP5 214 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 STXBP3O00186 592 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
DDR1-240ENST00000454612 GH2P01242 217 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ZNF18P17022 549 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 VPS41P49754 854 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ASIC2Q16515 512 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 NOX5Q96PH1 765 aa12.3□□□□□ -0.44
DDR1-240ENST00000454612 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
DDR1-240ENST00000454612 SPEF2Q9C093 1822 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms