RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 FAM13AO94988 1023 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 KIF20AO95235 890 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 ARHGAP4P98171 946 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 SAR1BQ9Y6B6 198 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 UTRNP46939 3433 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 ATP1A1P05023 1023 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 NR2F2P24468 414 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 COASYQ13057 564 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 DNAJC21Q5F1R6 531 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 KSR1Q8IVT5 923 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 GPR161Q8N6U8 529 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 MMTAG2Q9BU76 263 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 LACRTQ9GZZ8 138 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 PDS5AQ29RF7 1337 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 LRRC53A6NM62 1247 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 TACC1O75410 805 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
SMPD4-213ENST00000454468 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 LRRC27Q9C0I9 530 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 RIOX1Q9H6W3 641 aa13.25□□□□□ -0.29
SMPD4-213ENST00000454468 CETN3O15182 167 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 NCK2O43639 380 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 CYP2J2P51589 502 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 ECM1Q16610 540 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 APTXQ7Z2E3 356 aaKnown RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 NOA1Q8NC60 698 aaKnown RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 FBXO28Q9NVF7 368 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 PRPHP41219 470 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 PSMC6P62333 389 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 PRPF4BQ13523 1007 aaKnown RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 SMC1AQ14683 1233 aaKnown RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-213ENST00000454468 KCNB1Q14721 858 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 FAM133AQ8N9E0 248 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 ANKS1AQ92625 1134 aa13.24□□□□□ -0.29
SMPD4-213ENST00000454468 ZBED6P86452 979 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 HAUS3Q68CZ6 603 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 HAUS4Q9H6D7 363 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ARHGEF10LQ9HCE6 1279 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 PDE11AQ9HCR9 933 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ADAMTS1Q9UHI8 967 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 HDAC9Q9UKV0 1011 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 NID2Q14112 1375 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 EPHB6O15197 1021 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ALAS1P13196 640 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 DAGLBQ8NCG7 672 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 NUP58Q9BVL2 599 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 NT5C3AQ9H0P0 336 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 STK32BQ9NY57 414 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 EHD2Q9NZN4 543 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 STK17AQ9UEE5 414 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 MYH6P13533 1939 aa13.23□□□□□ -0.29
SMPD4-213ENST00000454468 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-213ENST00000454468 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 ZBTB39O15060 712 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-213ENST00000454468 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 KCNJ6P48051 423 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
SMPD4-213ENST00000454468 KLHL30Q0D2K2 578 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 MAN2A1Q16706 1144 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 SFR1Q86XK3 245 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 C7orf25Q9BPX7 421 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 FGFBP2Q9BYJ0 223 aa13.22□□□□□ -0.29
SMPD4-213ENST00000454468 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms