RNA–Protein interactions for RNA: ENST00000454257.5

CCDC148-207, Transcript of coiled-coil domain containing 148, humanhuman

TSL 2

Gene CCDC148, Length 2,075 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-207ENST00000454257 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 EPHB4P54760 987 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 TDRD12Q587J7 1177 aaKnown RBP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 KRT79Q5XKE5 535 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 ZNF713Q8N859 430 aaPredicted RBP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 FHDC1Q9C0D6 1143 aaPredicted RBP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 PLEKHA4Q9H4M7 779 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 BLOC1S4Q9NUP1 217 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 TMEM260Q9NX78 707 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
CCDC148-207ENST00000454257 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
CCDC148-207ENST00000454257 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 CXCR5P32302 372 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 BTDP43251 543 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 MAGEA9P43362 315 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 ADCY7P51828 1080 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 PPFIA1Q13136 1202 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 PSMD2Q13200 908 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 DNAJC21Q5F1R6 531 aaKnown RBP10.87□□□□□ -0.67
CCDC148-207ENST00000454257 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 C8orf74Q6P047 294 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 EMBQ6PCB8 327 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 RAD54LQ92698 747 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 MTMR9Q96QG7 549 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 RIC8AQ9NPQ8 531 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 LUC7LQ9NQ29 371 aaKnown RBP10.87□□□□□ -0.67
CCDC148-207ENST00000454257 STIM2Q9P246 746 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
CCDC148-207ENST00000454257 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 IRS2Q9Y4H2 1338 aa10.87□□□□□ -0.67
CCDC148-207ENST00000454257 SSU72P8A0A1W2PR75 194 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 PJA2O43164 708 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SHOX2O60902 331 aaPredicted RBP10.86□□□□□ -0.67
CCDC148-207ENST00000454257 HSF2BPO75031 334 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 ERCC3P19447 782 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 ATP2B2Q01814 1243 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 RASSF7Q02833 373 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 GFPT1Q06210 699 aaPredicted RBP10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SLC9C1Q4G0N8 1177 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 CCDC40Q4G0X9 1142 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 GBP6Q6ZN66 633 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 TEX11Q8IYF3 940 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 ANKRD13CQ8N6S4 541 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 BAP1Q92560 729 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 DDX12PQ92771 950 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SYT17Q9BSW7 474 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SNED1Q8TER0 1413 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 POTEMA6NI47 508 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 VGLL3A8MV65 326 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 NCK2O43639 380 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 BUB1O43683 1085 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 PLCG2P16885 1265 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 CORO7P57737 925 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 PDIA5Q14554 519 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 GRIK5Q16478 980 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SKIDA1Q1XH10 827 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 CFAP221Q4G0U5 840 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 HAUS3Q68CZ6 603 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 LRRC55Q6ZSA7 311 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 MYOCDQ8IZQ8 938 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 RNF10Q8N5U6 811 aaKnown RBP10.86□□□□□ -0.67
CCDC148-207ENST00000454257 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 CEP95Q96GE4 821 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 RTFDC1Q9BY42 306 aaPredicted RBP10.86□□□□□ -0.67
CCDC148-207ENST00000454257 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
CCDC148-207ENST00000454257 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
CCDC148-207ENST00000454257 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 SLC37A4O43826 429 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 MARCH6O60337 910 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 TDP2O95551 362 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 TM4SF1P30408 202 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 SLC1A4P43007 532 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 MRPS25P82663 173 aaKnown RBP10.85□□□□□ -0.67
CCDC148-207ENST00000454257 LRRC41Q15345 812 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
CCDC148-207ENST00000454257 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
CCDC148-207ENST00000454257 SFMBT2Q5VUG0 894 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 ALS2CLQ60I27 953 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 ARHGAP27Q6ZUM4 889 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 CEP72Q9P209 647 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 RNF14Q9UBS8 474 aa10.85□□□□□ -0.67
CCDC148-207ENST00000454257 RTCBQ9Y3I0 505 aaKnown RBP10.85□□□□□ -0.67
CCDC148-207ENST00000454257 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms