RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	NOVA2	Q9UNW9	492 aa	Known RBP	21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	NIP7	Q9Y221	180 aa	Known RBP eCLIP	21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	FAM107A	O95990	144 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	CDR1	P51861	262 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	CENPP	Q6IPU0	288 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132		M0R2N6	131 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	UAP1	Q16222	522 aa	Predicted RBP	21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	SMIM5	Q71RC9	77 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	C7orf25	Q9BPX7	421 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	MAD2L2	Q9UI95	211 aa		21.59	■■□□□ 1.05
LMBR1-213	ENST00000454132	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	STXBP3	O00186	592 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	TRAF5	O00463	557 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	MYZAP	P0CAP1	466 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	FAM83B	Q5T0W9	1011 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	TMED8	Q6PL24	325 aa	Predicted RBP	21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	SV2B	Q7L1I2	683 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	FGFBP2	Q9BYJ0	223 aa		21.58	■■□□□ 1.05
LMBR1-213	ENST00000454132	CIC	Q96RK0	1608 aa	Predicted RBP	21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	RPSA	P08865	295 aa	Known RBP	21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	CDC37	Q16543	378 aa	Predicted RBP	21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	SFMBT2	Q5VUG0	894 aa		21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	BICDL1	Q6ZP65	573 aa		21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	TMBIM4	Q9HC24	238 aa		21.58	■■□□□ 1.04
LMBR1-213	ENST00000454132	CHUK	O15111	745 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	LCA5L	O95447	670 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	SLC9C1	Q4G0N8	1177 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	KCNK18	Q7Z418	384 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	ADAT2	Q7Z6V5	191 aa	Known RBP	21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	DPH5	Q9H2P9	285 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	COL4A1	P02462	1669 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	TEX2	Q8IWB9	1127 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	TBCK	Q8TEA7	893 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	NSUN4	Q96CB9	384 aa	Known RBP	21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	TBC1D31	Q96DN5	1066 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	CALML4	Q96GE6	196 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	FAM84B	Q96KN1	310 aa	Predicted RBP	21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	MKNK2	Q9HBH9	465 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	ADAMTSL3	P82987	1691 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	DOCK2	Q92608	1830 aa		21.57	■■□□□ 1.04
LMBR1-213	ENST00000454132	GRID2IP	A4D2P6	1211 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	SMCO2	A6NFE2	343 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	TMCO5B	A8MYB1	307 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	PJA2	O43164	708 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	GLE1	Q53GS7	698 aa	Known RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CCDC84	Q86UT8	332 aa	Predicted RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CDK5RAP3	Q96JB5	506 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CELF4	Q9BZC1	486 aa	Known RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	BLOC1S4	Q9NUP1	217 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	FBXL5	Q9UKA1	691 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	GMNC	A6NCL1	334 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	SMIM23	A6NLE4	172 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	RASSF9	O75901	435 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	NOL4	O94818	638 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	ACTN1	P12814	892 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	ITGA4	P13612	1032 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	TRH	P20396	242 aa	Predicted RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	TNFRSF8	P28908	595 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	GRB10	Q13322	594 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CAVIN4	Q5BKX8	364 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	SLC51A	Q86UW1	340 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	FAM228A	Q86W67	206 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	ODF2L	Q9ULJ1	636 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	PSEN1	P49768	467 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	USP38	Q8NB14	1042 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	INPP4A	Q96PE3	977 aa	Predicted RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CARD10	Q9BWT7	1032 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	CRNKL1	Q9BZJ0	848 aa	Known RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	SAP30BP	Q9UHR5	308 aa	Known RBP	21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	LEMD3	Q9Y2U8	911 aa		21.56	■■□□□ 1.04
LMBR1-213	ENST00000454132	HMGB1P1	B2RPK0	211 aa	Predicted RBP	21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	DAPK3	O43293	454 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	FGR	P09769	529 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	SMTN	P53814	917 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	MAGOH	P61326	146 aa	Known RBP	21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	ZNF844	Q08AG5	666 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	USP17L2	Q6R6M4	530 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	TAF4B	Q92750	862 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	MAGOHB	Q96A72	148 aa	Known RBP	21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	UBA5	Q9GZZ9	404 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	TAF1D	Q9H5J8	278 aa	Predicted RBP	21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	AMACR	Q9UHK6	382 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	AMPD3	Q01432	767 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	MEI1	Q5TIA1	1274 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	CEP83	Q9Y592	693 aa		21.55	■■□□□ 1.04
LMBR1-213	ENST00000454132	PPP1R12B	O60237	982 aa	Predicted RBP	21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	MYL1	P05976	194 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	NF2	P35240	595 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	COPB2	P35606	906 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	KLHL30	Q0D2K2	578 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	NAB2	Q15742	525 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	CYB5D1	Q6P9G0	228 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	LRRC55	Q6ZSA7	311 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	BANK1	Q8NDB2	785 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	RAPGEF5	Q92565	580 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	DDX12P	Q92771	950 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	SEC16B	Q96JE7	1060 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	ZHX3	Q9H4I2	956 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	BARHL2	Q9NY43	387 aa		21.54	■■□□□ 1.04
LMBR1-213	ENST00000454132	ORC4	O43929	436 aa		21.54	■■□□□ 1.04

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