RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SEMA3FQ13275 785 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 GNPTABQ3T906 1256 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
VPS16-205ENST00000453689 XRRA1Q6P2D8 792 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
VPS16-205ENST00000453689 AFG1LQ8WV93 481 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.28
VPS16-205ENST00000453689 ZMYND12Q9H0C1 365 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 GLT8D2Q9H1C3 349 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 GRIN2DO15399 1336 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 ARVCFO00192 962 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 ADAMTS3O15072 1205 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 PQBP1O60828 265 aaKnown RBP16.76■□□□□ 0.27
VPS16-205ENST00000453689 ICAM3P32942 547 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 PSMC6P62333 389 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 SP2Q02086 613 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 CUL4AQ13619 759 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 ANKRD33Q7Z3H0 272 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
VPS16-205ENST00000453689 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 CCDC12Q8WUD4 166 aaPredicted RBP16.76■□□□□ 0.27
VPS16-205ENST00000453689 EMID1Q96A84 441 aaPredicted RBP16.76■□□□□ 0.27
VPS16-205ENST00000453689 EHMT1Q9H9B1 1298 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
VPS16-205ENST00000453689 MROH7Q68CQ1 1323 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 MYH9P35579 1960 aaKnown RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 SPATA31C2B4DYI2 1134 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 FIBPO43427 364 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 DEXIO95424 95 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 GGPS1O95749 300 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 FOSP01100 380 aaPredicted RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 MMP3P08254 477 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 UBA1P22314 1058 aaKnown RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 AP3B2Q13367 1082 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 LAMC2Q13753 1193 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 CELF3Q5SZQ8 465 aaKnown RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 MYSM1Q5VVJ2 828 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 MTG1Q9BT17 334 aaPredicted RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 ANO3Q9BYT9 981 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
VPS16-205ENST00000453689 PRDM5Q9NQX1 630 aaPredicted RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 COLQQ9Y215 455 aaPredicted RBP16.75■□□□□ 0.27
VPS16-205ENST00000453689 TANC1Q9C0D5 1861 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 SORBS3O60504 671 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 JAK2O60674 1132 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 KPNA6O60684 536 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 CLTBP09497 229 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
VPS16-205ENST00000453689 FAAP100Q0VG06 881 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 JAKMIP3Q5VZ66 844 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 PPTC7Q8NI37 304 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 TOX2Q96NM4 488 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 GDF15Q99988 308 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 PRO3102Q9H379 93 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 BCAS3Q9H6U6 928 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 SH3GLB2Q9NR46 395 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 ORC3Q9UBD5 711 aaPredicted RBP16.74■□□□□ 0.27
VPS16-205ENST00000453689 PRKAG2Q9UGJ0 569 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.74■□□□□ 0.27
VPS16-205ENST00000453689 UBIAD1Q9Y5Z9 338 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 SCN5AQ14524 2016 aa16.74■□□□□ 0.27
VPS16-205ENST00000453689 TRIM43BA6NCK2 446 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 DTNBO60941 627 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 ITGB5P18084 799 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 GNA11P29992 359 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 MAGEA10P43363 369 aaPredicted RBP16.73■□□□□ 0.27
VPS16-205ENST00000453689 HSDL1Q3SXM5 330 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 TRIM43Q96BQ3 446 aaPredicted RBP16.73■□□□□ 0.27
VPS16-205ENST00000453689 GPRASP2Q96D09 838 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 MLXIPQ9HAP2 919 aa16.73■□□□□ 0.27
VPS16-205ENST00000453689 CD4P01730 458 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 SREBF1P36956 1147 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
VPS16-205ENST00000453689 BECN1Q14457 450 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 NEDD9Q14511 834 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 DGKDQ16760 1214 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
VPS16-205ENST00000453689 WASF1Q92558 559 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 SPATA33Q96N06 139 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 SENP7Q9BQF6 1050 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 JADE2Q9NQC1 790 aa16.72■□□□□ 0.27
VPS16-205ENST00000453689 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
VPS16-205ENST00000453689 TLR3O15455 904 aaKnown RBP16.71■□□□□ 0.27
VPS16-205ENST00000453689 HOXD8P13378 290 aaPredicted RBP16.71■□□□□ 0.27
VPS16-205ENST00000453689 FDPSP14324 419 aaKnown RBP16.71■□□□□ 0.27
VPS16-205ENST00000453689 NLRP5P59047 1200 aa16.71■□□□□ 0.27
VPS16-205ENST00000453689 ARHGAP4P98171 946 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms