RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CHP1Q99653 195 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 NT5C3AQ9H0P0 336 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 PVALEFA0A1B0GWK0 134 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 COASYQ13057 564 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 SYCP1Q15431 976 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 CATSPER3Q86XQ3 398 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 ASTN2O75129 1339 aaPredicted RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 MSH4O15457 936 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
VTA1-203ENST00000452973 SREBF1P36956 1147 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 ERVK-24P63145 666 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
VTA1-203ENST00000452973 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 ITIH6Q6UXX5 1313 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
VTA1-203ENST00000452973 POLD1P28340 1107 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 ETNPPLQ8TBG4 499 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 DNAJC19Q96DA6 116 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 AGPAT5Q9NUQ2 364 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
VTA1-203ENST00000452973 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
VTA1-203ENST00000452973 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 CYP3A7P24462 503 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 CASQ1P31415 396 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 DNM2P50570 870 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
VTA1-203ENST00000452973 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 FAM114A1Q8IWE2 563 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 LENG9Q96B70 501 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 ABL1P00519 1130 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
VTA1-203ENST00000452973 CRYGNQ8WXF5 182 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
VTA1-203ENST00000452973 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
VTA1-203ENST00000452973 TRAF5O00463 557 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 ASNSP08243 561 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 RASSF7Q02833 373 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 ELF2Q15723 593 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 HAUS3Q68CZ6 603 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 MYOCDQ8IZQ8 938 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
VTA1-203ENST00000452973 NFKBIEO00221 500 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 INPP5BP32019 993 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 CCDC65Q8IXS2 484 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
VTA1-203ENST00000452973 ERMNQ8TAM6 284 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 PIGOQ8TEQ8 1089 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 CYP11B2P19099 503 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 TGFB2P61812 414 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 SPIRE1Q08AE8 756 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 SEMA3FQ13275 785 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
VTA1-203ENST00000452973 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 TMTC1Q8IUR5 882 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 FAM207AQ9NSI2 230 aaPredicted RBP13.09□□□□□ -0.31
VTA1-203ENST00000452973 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 DNM3Q9UQ16 869 aa13.09□□□□□ -0.31
VTA1-203ENST00000452973 GOLGA6L9A6NEM1 432 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 EML1O00423 815 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 PPP1R2P41236 205 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 TRIM14Q14142 442 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
VTA1-203ENST00000452973 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 Q4G0T1 1027 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
VTA1-203ENST00000452973 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 CCDC155Q8N6L0 562 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 TSG101Q99816 390 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 BHMT2Q9H2M3 363 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 MMRN2Q9H8L6 949 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms