RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SP100P23497 879 aaPredicted RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 SLC1A4P43007 532 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 LACTBP83111 547 aaPredicted RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 GFPT1Q06210 699 aaPredicted RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 ATG9AQ7Z3C6 839 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 CACNA2D4Q7Z3S7 1137 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 RBM12BQ8IXT5 1001 aaKnown RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 TLCD1Q96CP7 247 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 PNMA3Q9UL41 463 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 ZNF232Q9UNY5 417 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 SLC12A7Q9Y666 1083 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 MYH7BA7E2Y1 1941 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 PALMO75781 387 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 IFNAR1P17181 557 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 GNAQP50148 359 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 LMNTD2Q8IXW0 634 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 FAM163AQ96GL9 167 aaPredicted RBP20.44■□□□□ 0.86
PTPA-223ENST00000452489 PRMT1Q99873 361 aaKnown RBP20.44■□□□□ 0.86
PTPA-223ENST00000452489 DDX21Q9NR30 783 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPA-223ENST00000452489 ARHGEF3Q9NR81 526 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 BLOC1S6Q9UL45 172 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 LRRC42Q9Y546 428 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 TNNC1P63316 161 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 ZNF174Q15697 407 aa20.44■□□□□ 0.86
PTPA-223ENST00000452489 RABL6Q3YEC7 729 aaPredicted RBP20.44■□□□□ 0.86
PTPA-223ENST00000452489 ABCC12Q96J65 1359 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 GNAZP19086 355 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 TPP2P29144 1249 aaPredicted RBP20.43■□□□□ 0.86
PTPA-223ENST00000452489 COPS2P61201 443 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 LBRQ14739 615 aaKnown RBP20.43■□□□□ 0.86
PTPA-223ENST00000452489 GALNTL6Q49A17 601 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 CCDC38Q502W7 563 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 DLGAP2Q9P1A6 1054 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 SOS2Q07890 1332 aaPredicted RBP20.43■□□□□ 0.86
PTPA-223ENST00000452489 A0A0G2JS52 829 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 GOLGA6L10A0A0M3HER8 536 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 RAPGEF3O95398 923 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 LCA5LO95447 670 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 IFNAR2P48551 515 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 EHHADHQ08426 723 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 CUL1Q13616 776 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 LMBR1LQ6UX01 489 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 USP38Q8NB14 1042 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 MOV10L1Q9BXT6 1211 aaKnown RBP20.43■□□□□ 0.86
PTPA-223ENST00000452489 ADAM7Q9H2U9 754 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
PTPA-223ENST00000452489 GRID2IPA4D2P6 1211 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 SMAPO00193 183 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 SGSM1Q2NKQ1 1148 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 TMC3Q7Z5M5 1100 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.42■□□□□ 0.864e-10■■■■■ 33.2
PTPA-223ENST00000452489 F8VZ95 297 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 HIP1RO75146 1068 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 BNIP1Q12981 228 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 FOXB2Q5VYV0 432 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 ANKRD23Q86SG2 305 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 MYLK4Q86YV6 388 aaPredicted RBP20.42■□□□□ 0.86
PTPA-223ENST00000452489 SYCP3Q8IZU3 236 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 XAGE3Q8WTP9 111 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 RAB17Q9H0T7 212 aa20.42■□□□□ 0.86
PTPA-223ENST00000452489 FAM207AQ9NSI2 230 aaPredicted RBP20.42■□□□□ 0.86
PTPA-223ENST00000452489 HGSO14964 777 aaPredicted RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 CYP27B1O15528 508 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 PJA2O43164 708 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 SETSIPP0DME0 302 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 ATP6V1C1P21283 382 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 ZC3H6P61129 1189 aaKnown RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 PLS1Q14651 629 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 KIFAP3Q92845 792 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 BICD1Q96G01 975 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 PBKQ96KB5 322 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 DNAAF2Q9NVR5 837 aaKnown RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 RMND1Q9NWS8 449 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 DAPK3O43293 454 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 MYL1P05976 194 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 ITGA6P23229 1130 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 ZNF131P52739 623 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 RAD23BP54727 409 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 DHX9Q08211 1270 aaKnown RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 MTMR3Q13615 1198 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 MIIPQ5JXC2 388 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 SGMS1Q86VZ5 419 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 MAIP1Q8WWC4 291 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 APPBP2Q92624 585 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 FERMT2Q96AC1 680 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 TMEM87BQ96K49 555 aa20.41■□□□□ 0.86
PTPA-223ENST00000452489 METTL22Q9BUU2 404 aaPredicted RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 MMADHCQ9H3L0 296 aaPredicted RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 BIN2Q9UBW5 565 aaPredicted RBP20.41■□□□□ 0.86
PTPA-223ENST00000452489 MYH1P12882 1939 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 A0A1W2PQJ5 194 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 ATP5J2-PTCD1G3V325 749 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 ABLIM1O14639 778 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms