RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 SMCO2A6NFE2 343 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 EDIL3O43854 480 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 FXR1P51114 621 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 MDM2Q00987 491 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 KIF2CQ99661 725 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 SENP7Q9BQF6 1050 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 RTEL1Q9NZ71 1219 aa18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-205ENST00000452128 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 LAMA2P24043 3122 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 HAS3O00219 553 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 PPFIA4O75335 1185 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 MYL3P08590 195 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 NAPAP54920 295 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 BADQ92934 168 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 TRPV6Q9H1D0 765 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 TMEM39AQ9NV64 488 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 TELO2Q9Y4R8 837 aa18.49■□□□□ 0.55
SCAMP4-205ENST00000452128 FIBPO43427 364 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 PFKFB2O60825 505 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 ATP9AO75110 1047 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 GGPS1O95749 300 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 TIMP1P01033 207 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 FOSP01100 380 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 ADCY7P51828 1080 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 EPHB4P54760 987 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 VWCEQ96DN2 955 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 GLT8D2Q9H1C3 349 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 TMEM260Q9NX78 707 aa18.48■□□□□ 0.55
SCAMP4-205ENST00000452128 B4GALT4O60513 344 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 KCNA2P16389 499 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 SREBF1P36956 1147 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 AK2P54819 239 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 SCRN1Q12765 414 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 NPY5RQ15761 445 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 DGKDQ16760 1214 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 BRDTQ58F21 947 aaPredicted RBP18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 CYP2W1Q8TAV3 490 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 GPRASP2Q96D09 838 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 C16orf70Q9BSU1 422 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 SLC26A6Q9BXS9 759 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 JADE2Q9NQC1 790 aa18.47■□□□□ 0.55
SCAMP4-205ENST00000452128 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 F2P00734 622 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 AP3B2Q13367 1082 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 GNPTABQ3T906 1256 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 METTL7BQ6UX53 244 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 C16orf59Q7L2K0 433 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 SPATA33Q96N06 139 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 ANO3Q9BYT9 981 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 UBE2OQ9C0C9 1292 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 SH3GLB2Q9NR46 395 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 PRKAG2Q9UGJ0 569 aa18.46■□□□□ 0.55
SCAMP4-205ENST00000452128 SPDYE3A6NKU9 549 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 M0R2N6 131 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 MEIS1O00470 390 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 CYP3A4P08684 503 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 NEDD9Q14511 834 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 LRIT3Q3SXY7 679 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 TDHQ8IZJ6 230 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 PPP1R13LQ8WUF5 828 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 PGBD1Q96JS3 809 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 GPR20Q99678 358 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 MXRA8Q9BRK3 442 aa18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 TRMT13Q9NUP7 481 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-205ENST00000452128 SOX1O00570 391 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 MAFGO15525 162 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 LARGE1O95461 756 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 HOXC8P31273 242 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 STK3Q13188 491 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 HIC1Q14526 733 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 ME3Q16798 604 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 NLRX1Q86UT6 975 aa18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 LBHD1Q9BQE6 289 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-205ENST00000452128 TLR3O15455 904 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 RAG1P15918 1043 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 ST3GAL1Q11201 340 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 SHHQ15465 462 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 C9orf50Q5SZB4 431 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 FAM177A1Q8N128 213 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms