RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 CYP3A4P08684 503 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 SREBF1P36956 1147 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 USP11P51784 963 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 HMGN5P82970 282 aaKnown RBP10.13□□□□□ -0.79
COL8A1-203ENST00000452013 CELF3Q5SZQ8 465 aaKnown RBP10.13□□□□□ -0.79
COL8A1-203ENST00000452013 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 CCDC83Q8IWF9 413 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 NSUN7Q8NE18 718 aaKnown RBP10.13□□□□□ -0.79
COL8A1-203ENST00000452013 COPS5Q92905 334 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 EMID1Q96A84 441 aaPredicted RBP10.13□□□□□ -0.79
COL8A1-203ENST00000452013 SENP7Q9BQF6 1050 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 MXRA8Q9BRK3 442 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 MTG1Q9BT17 334 aaPredicted RBP10.13□□□□□ -0.79
COL8A1-203ENST00000452013 BRMS1Q9HCU9 246 aa10.13□□□□□ -0.79
COL8A1-203ENST00000452013 COL11A1P12107 1806 aaPredicted RBP10.12□□□□□ -0.79
COL8A1-203ENST00000452013 A0A0U1RQG5 324 aaPredicted RBP10.12□□□□□ -0.79
COL8A1-203ENST00000452013 DCDC2CA8MYV0 355 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 ARVCFO00192 962 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 GGPS1O95749 300 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
COL8A1-203ENST00000452013 RTP1P59025 263 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
COL8A1-203ENST00000452013 ARHGAP4P98171 946 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 SP2Q02086 613 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 ARHGAP1Q07960 439 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 MTMR1Q13613 665 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 DGKDQ16760 1214 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 LRRC26Q2I0M4 334 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 CEP55Q53EZ4 464 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 CXCL17Q6UXB2 119 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 NIPA1Q7RTP0 329 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 FAM184AQ8NB25 1140 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 DAGLBQ8NCG7 672 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 AFG1LQ8WV93 481 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 PGBD1Q96JS3 809 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 SPATA33Q96N06 139 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 PRKAG2Q9UGJ0 569 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 KCNJ14Q9UNX9 436 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 ATP11BQ9Y2G3 1177 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 KIF3AQ9Y496 699 aa10.12□□□□□ -0.79
COL8A1-203ENST00000452013 MROH7Q68CQ1 1323 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 MEIS1O00470 390 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 NOP56O00567 594 aaKnown RBP10.11□□□□□ -0.79
COL8A1-203ENST00000452013 JAK2O60674 1132 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 ITGB5P18084 799 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 UBA1P22314 1058 aaKnown RBP10.11□□□□□ -0.79
COL8A1-203ENST00000452013 PTGS1P23219 599 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 CDK7P50613 346 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 PURAQ00577 322 aaKnown RBP10.11□□□□□ -0.79
COL8A1-203ENST00000452013 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 SNX17Q15036 470 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 NONOQ15233 471 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL8A1-203ENST00000452013 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL8A1-203ENST00000452013 METTL7BQ6UX53 244 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 CYFIP1Q7L576 1253 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 KRT25Q7Z3Z0 450 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 C7orf61Q8IZ16 206 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 PPTC7Q8NI37 304 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 TOX2Q96NM4 488 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 AIFM3Q96NN9 605 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
COL8A1-203ENST00000452013 CCDC194A0A1B0GVG4 234 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 TLR3O15455 904 aaKnown RBP10.1□□□□□ -0.79
COL8A1-203ENST00000452013 MMP3P08254 477 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 CIITAP33076 1130 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 KRT2P35908 639 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 TLE2Q04725 743 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
COL8A1-203ENST00000452013 TRIM60Q495X7 471 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 ANKRD33Q7Z3H0 272 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 PLA2G4DQ86XP0 818 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 TBCKQ8TEA7 893 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 CRYGNQ8WXF5 182 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 SEPT1Q8WYJ6 367 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 NAP1L4Q99733 375 aaKnown RBP10.1□□□□□ -0.79
COL8A1-203ENST00000452013 SDF4Q9BRK5 362 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 KATNAL1Q9BW62 490 aa10.1□□□□□ -0.79
COL8A1-203ENST00000452013 M0R2N6 131 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 SORBS3O60504 671 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 DTNBO60941 627 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 ATP9AO75110 1047 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 ARP10275 920 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 KCNA2P16389 499 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-203ENST00000452013 ST3GAL1Q11201 340 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 SEMA3FQ13275 785 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 HSDL1Q3SXM5 330 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
COL8A1-203ENST00000452013 KRT40Q6A162 431 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 SLC43A3Q8NBI5 491 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 CYP2W1Q8TAV3 490 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
COL8A1-203ENST00000452013 TBC1D22BQ9NU19 505 aa10.09□□□□□ -0.79
COL8A1-203ENST00000452013 TMEM39AQ9NV64 488 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms