RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ACAD9Q9H845 621 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 TRAF5O00463 557 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 KLRC4O43908 158 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 PSMD10O75832 226 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 ITGB5P18084 799 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 BAATQ14032 418 aaPredicted RBP15.98■□□□□ 0.15
USP39-207ENST00000450066 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
USP39-207ENST00000450066 ENOX1Q8TC92 643 aaKnown RBP15.98■□□□□ 0.15
USP39-207ENST00000450066 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 RPA1P27694 616 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 ZNF75DP51815 510 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 PLS1Q14651 629 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 LRCH2Q5VUJ6 765 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 NCAPH2Q6IBW4 605 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
USP39-207ENST00000450066 OTOP1Q7RTM1 612 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 KCNK18Q7Z418 384 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 IL31RAQ8NI17 732 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 ZNF577Q9BSK1 485 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 RRAGCQ9HB90 399 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 PXMP2Q9NR77 195 aa15.98■□□□□ 0.15
USP39-207ENST00000450066 PPP1R3GB7ZBB8 358 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 RHOBTB3O94955 611 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 IRX3P78415 501 aaPredicted RBP15.97■□□□□ 0.15
USP39-207ENST00000450066 FMR1Q06787 632 aaKnown RBP eCLIP15.97■□□□□ 0.153e-6■■■□□ 16.1
USP39-207ENST00000450066 PPP2R5CQ13362 524 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 MOGSQ13724 837 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 MCM6Q14566 821 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 PGM5Q15124 567 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 XRRA1Q6P2D8 792 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 CNNM4Q6P4Q7 775 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 POTEEQ6S8J3 1075 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 CHST13Q8NET6 341 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 SLC10A4Q96EP9 437 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 RIT2Q99578 217 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
USP39-207ENST00000450066 HSD3B7Q9H2F3 369 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 UBIAD1Q9Y5Z9 338 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
USP39-207ENST00000450066 MED24O75448 989 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 ARP10275 920 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 EIF2AK2P19525 551 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 FKBP1BP68106 108 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 MRPS9P82933 396 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 ARHGEF16Q5VV41 709 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 CATSPER3Q86XQ3 398 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 KCTD17Q8N5Z5 321 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 CCDC47Q96A33 483 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 PDCD2LQ9BRP1 358 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 CYP39A1Q9NYL5 469 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 POTEB3A0JP26 581 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 IPO5O00410 1097 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 GAS7O60861 476 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 SPATA31C1P0DKV0 1188 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 ASIC1P78348 528 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■■□□ 14.9
USP39-207ENST00000450066 DHX8Q14562 1220 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 POTEBQ6S5H4 581 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 SMYD4Q8IYR2 804 aaPredicted RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 MRFAP1L1Q96HT8 127 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 POLR3CQ9BUI4 534 aaPredicted RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 A1CFQ9NQ94 594 aaKnown RBP15.96■□□□□ 0.15
USP39-207ENST00000450066 JADE2Q9NQC1 790 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 KCNH7Q9NS40 1196 aa15.96■□□□□ 0.15
USP39-207ENST00000450066 PVALEFA0A1B0GWK0 134 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 MYMKA6NI61 221 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 HERVK_113P62684 666 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 SNAPC2Q13487 334 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 RIOX2Q8IUF8 465 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
USP39-207ENST00000450066 NSUN6Q8TEA1 469 aaKnown RBP15.95■□□□□ 0.14
USP39-207ENST00000450066 MED15Q96RN5 788 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 FANCLQ9NW38 375 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 BTBD7Q9P203 1132 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 EML1O00423 815 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 CDC25BP30305 580 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 GJA5P36382 358 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 B3GNT9Q6UX72 402 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 HSD17B14Q9BPX1 270 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 EIF2AK1Q9BQI3 630 aaKnown RBP15.95■□□□□ 0.14
USP39-207ENST00000450066 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 NFE2L3Q9Y4A8 694 aa15.95■□□□□ 0.14
USP39-207ENST00000450066 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
USP39-207ENST00000450066 MTMR1Q13613 665 aa15.94■□□□□ 0.14
USP39-207ENST00000450066 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
USP39-207ENST00000450066 PURBQ96QR8 312 aaKnown RBP15.94■□□□□ 0.14
USP39-207ENST00000450066 SPATC1LQ9H0A9 340 aa15.94■□□□□ 0.14
USP39-207ENST00000450066 TUFT1Q9NNX1 390 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms