RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MIGA1Q8NAN2 632 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 MSLNLQ96KJ4 702 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 CCDC17Q96LX7 622 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 USB1Q9BQ65 265 aaKnown RBP9.51□□□□□ -0.89
LINC01961-201ENST00000449954 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
LINC01961-201ENST00000449954 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 CTDP1Q9Y5B0 961 aaPredicted RBP9.51□□□□□ -0.89
LINC01961-201ENST00000449954 MICAL3Q7RTP6 2002 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 KPNA6O60684 536 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 ZBED4O75132 1171 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 PDGFBP01127 241 aaPredicted RBP9.5□□□□□ -0.89
LINC01961-201ENST00000449954 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
LINC01961-201ENST00000449954 MYL3P08590 195 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 OAZ1P54368 228 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 CNTN2Q02246 1040 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 COASYQ13057 564 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 GPNMBQ14956 572 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 DUSP28Q4G0W2 176 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 TAPT1Q6NXT6 567 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 CLEC10AQ8IUN9 316 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 TMEM105Q8N8V8 129 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
LINC01961-201ENST00000449954 YME1L1Q96TA2 773 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
LINC01961-201ENST00000449954 RWDD3Q9Y3V2 267 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 FASNP49327 2511 aaKnown RBP9.5□□□□□ -0.89
LINC01961-201ENST00000449954 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 MYO7AQ13402 2215 aa9.5□□□□□ -0.89
LINC01961-201ENST00000449954 C5orf67F2Z3F1 127 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 NBNO60934 754 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 LMNAP02545 664 aaKnown RBP9.49□□□□□ -0.89
LINC01961-201ENST00000449954 SDHBP21912 280 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 PTGS1P23219 599 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 ADAM15Q13444 863 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 PTGISQ16647 500 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 CCDC158Q5M9N0 1113 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 TTC39AQ5SRH9 613 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 FBXO16Q8IX29 292 aaPredicted RBP9.49□□□□□ -0.89
LINC01961-201ENST00000449954 KIAA2013Q8IYS2 634 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 MYOCDQ8IZQ8 938 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 KANSL2Q9H9L4 492 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 PDGFCQ9NRA1 345 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
LINC01961-201ENST00000449954 MYO5AQ9Y4I1 1855 aaKnown RBP9.49□□□□□ -0.89
LINC01961-201ENST00000449954 ASPMQ8IZT6 3477 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 TRIP12Q14669 1992 aaPredicted RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 SPTBN2O15020 2390 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 RAD21O60216 631 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 CD2BP2O95400 341 aaKnown RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 RB1P06400 928 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 FDX1P10109 184 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 ATF7P17544 494 aaPredicted RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 TRAF7Q6Q0C0 670 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 SESTD1Q86VW0 696 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 UBALD2Q8IYN6 164 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 KCNG4Q8TDN1 519 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 RPGRIP1Q96KN7 1286 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 ACAD9Q9H845 621 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 SLC38A10Q9HBR0 1119 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 MCM9Q9NXL9 1143 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
LINC01961-201ENST00000449954 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
LINC01961-201ENST00000449954 LINC01565O15544 149 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 LGR5O75473 907 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 IDH1O75874 414 aaKnown RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 MMP1P03956 469 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 CKBP12277 381 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 AKR1B1P15121 316 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 CTNNB1P35222 781 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 RPIAP49247 311 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 CLCN5P51795 746 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 TCTN1Q2MV58 587 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 HAUS7Q99871 368 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 RAVER2Q9HCJ3 691 aaKnown RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 A1CFQ9NQ94 594 aaKnown RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 PIH1D3Q9NQM4 214 aaKnown RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
LINC01961-201ENST00000449954 OTOGLQ3ZCN5 2332 aa9.47□□□□□ -0.89
LINC01961-201ENST00000449954 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC01961-201ENST00000449954 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 NDUFV2P19404 249 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 ZAP70P43403 619 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms