RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PTMSP20962 102 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 TECP42680 631 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 TMEM266Q2M3C6 531 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 ADALQ6DHV7 355 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 NLRX1Q86UT6 975 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 NPLOC4Q8TAT6 608 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 MAML3Q96JK9 1138 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
TNF-208ENST00000449264 SAGE1Q9NXZ1 904 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 GPR25O00155 361 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
TNF-208ENST00000449264 STAM2O75886 525 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 RGS2P41220 211 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
TNF-208ENST00000449264 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
TNF-208ENST00000449264 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
TNF-208ENST00000449264 INPP4AQ96PE3 977 aaPredicted RBP16.53■□□□□ 0.24
TNF-208ENST00000449264 POTEMA6NI47 508 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.23
TNF-208ENST00000449264 TBX3O15119 743 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 RGS20O76081 388 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 SHC4Q6S5L8 630 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 MRPS27Q92552 414 aaKnown RBP16.52■□□□□ 0.23
TNF-208ENST00000449264 GPRASP2Q96D09 838 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 FAM20AQ96MK3 541 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 APBA2Q99767 749 aa16.52■□□□□ 0.23
TNF-208ENST00000449264 AGO4Q9HCK5 861 aaKnown RBP16.52■□□□□ 0.23
TNF-208ENST00000449264 DIS3Q9Y2L1 958 aaKnown RBP16.52■□□□□ 0.23
TNF-208ENST00000449264 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 DDX39AO00148 427 aaKnown RBP16.51■□□□□ 0.23
TNF-208ENST00000449264 GAS7O60861 476 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 CAP1Q01518 475 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 SEMA3FQ13275 785 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
TNF-208ENST00000449264 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
TNF-208ENST00000449264 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 USP6NLQ92738 828 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
TNF-208ENST00000449264 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 GOLPH3LQ9H4A5 285 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
TNF-208ENST00000449264 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CHMP2AO43633 222 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CDC25AP30304 524 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 LONP1P36776 959 aaKnown RBP16.5■□□□□ 0.23
TNF-208ENST00000449264 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
TNF-208ENST00000449264 PRKCZQ05513 592 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CCDC73Q6ZRK6 1079 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
TNF-208ENST00000449264 MORC4Q8TE76 937 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CDHR1Q96JP9 859 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 RAB34Q9BZG1 259 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.5■□□□□ 0.23
TNF-208ENST00000449264 GABRQQ9UN88 632 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 SORBS3O60504 671 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 ATP9AO75110 1047 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 HOXC6P09630 235 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 PFKFB1P16118 471 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 LIG1P18858 919 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 CMA1P23946 247 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 ITGB3BPQ13352 177 aaPredicted RBP16.5■□□□□ 0.23
TNF-208ENST00000449264 CCL14Q16627 93 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 NCAPH2Q6IBW4 605 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 ZNF296Q8WUU4 475 aaPredicted RBP16.5■□□□□ 0.23
TNF-208ENST00000449264 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 FLRT1Q9NZU1 646 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 LRWD1Q9UFC0 647 aa16.5■□□□□ 0.23
TNF-208ENST00000449264 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 FKTNO75072 461 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 MBD3O95983 291 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 FLT3LGP49771 235 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
TNF-208ENST00000449264 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 VAV3Q9UKW4 847 aa16.49■□□□□ 0.23
TNF-208ENST00000449264 SPATA31C2B4DYI2 1134 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 MAFGO15525 162 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 PSMD10O75832 226 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 KCNA2P16389 499 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 TXLNAP40222 546 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 NDUFA8P51970 172 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms