RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	ARHGAP27	Q6ZUM4	889 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	ZFPM1	Q8IX07	1006 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	MBOAT7	Q96N66	472 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	IFIH1	Q9BYX4	1025 aa	Known RBP	18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	SH2D4A	Q9H788	454 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	PDE11A	Q9HCR9	933 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	KCNMB3	Q9NPA1	279 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	ATAD5	Q96QE3	1844 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	TARSL2	A2RTX5	802 aa	Known RBP	18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	CCDC66	A2RUB6	948 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	LRRC53	A6NM62	1247 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	MARCH6	O60337	910 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	USO1	O60763	962 aa	Known RBP	18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	EIF3J	O75822	258 aa	Known RBP	18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	SLURP2	P0DP57	97 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	CYP3A7	P24462	503 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	USP11	P51784	963 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	FKBP3	Q00688	224 aa	Known RBP	18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	GPS2	Q13227	327 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	QRICH1	Q2TAL8	776 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	PCDHA2	Q9Y5H9	948 aa		18.77	■□□□□ 0.6
TOM1-210	ENST00000449058	RRAGA	Q7L523	313 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	TRIM58	Q8NG06	486 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	DCAF4	Q8WV16	495 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	ZDHHC15	Q96MV8	337 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	COL4A3BP	Q9Y5P4	624 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	ERICH4	A6NGS2	130 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L15	C9J2P7	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L13	C9JLJ4	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L11	C9JVI0	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L18	D6R9N7	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L22	D6RA61	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L17	D6RBQ6	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L19	D6RCP7	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L20	D6RJB6	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	MCM3	P25205	808 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	CRK	P46108	304 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L24	Q0WX57	530 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	KCNMA1	Q12791	1236 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	TAF3	Q5VWG9	929 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	PDXDC1	Q6P996	788 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	USP17L6P	Q6QN14	398 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	CAPZA3	Q96KX2	299 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	CEP63	Q96MT8	703 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	NYAP2	Q9P242	653 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058	JRKL	Q9Y4A0	524 aa		18.76	■□□□□ 0.59
TOM1-210	ENST00000449058		E9PMD0	336 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	PDE2A	O00408	941 aa	Predicted RBP	18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	ASTE1	Q2TB18	679 aa	Predicted RBP	18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	KIAA1024	Q9UPX6	916 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	PCDHA1	Q9Y5I3	950 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	ZNF646	O15015	1829 aa	Predicted RBP	18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	ZNF185	O15231	689 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	PLA2G4B	P0C869	781 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	EEF2	P13639	858 aa	Known RBP	18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	MOXD1	Q6UVY6	613 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	CCDC65	Q8IXS2	484 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	NEK11	Q8NG66	645 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	CRYGN	Q8WXF5	182 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	FGFBP2	Q9BYJ0	223 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	ANO3	Q9BYT9	981 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	SNX12	Q9UMY4	172 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	CAPN6	Q9Y6Q1	641 aa		18.75	■□□□□ 0.59
TOM1-210	ENST00000449058	PJA2	O43164	708 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	TACC1	O75410	805 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	ALDH1B1	P30837	517 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	MARS	P56192	900 aa	Known RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	EXOC4	Q96A65	974 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	MRI	Q9BWK5	157 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	DHX36	Q9H2U1	1008 aa	Known RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	PSD3	Q9NYI0	1048 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	ADAM21	Q9UKJ8	722 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	BRWD3	Q6RI45	1802 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	TRAF5	O00463	557 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	AKR1B10	O60218	316 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	PRLR	P16471	622 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	SLC1A4	P43007	532 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	CDC37	Q16543	378 aa	Predicted RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	HGSNAT	Q68CP4	663 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	CCDC155	Q8N6L0	562 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	DEF6	Q9H4E7	631 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	KANSL2	Q9H9L4	492 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	MLXIP	Q9HAP2	919 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	JADE2	Q9NQC1	790 aa		18.74	■□□□□ 0.59
TOM1-210	ENST00000449058	MYH10	P35580	1976 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SSU72P8	A0A1W2PR75	194 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	POTEB3	A0JP26	581 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	FRMD3	A2A2Y4	597 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	LRRIQ3	A6PVS8	624 aa	Predicted RBP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	POTEC	B2RU33	542 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SSB	P05455	408 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	CYP11B2	P19099	503 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	AP3B2	Q13367	1082 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SLFN13	Q68D06	897 aa		18.73	■□□□□ 0.59

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