RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CD99L2Q8TCZ2 262 aa15.91■□□□□ 0.14
SHMT2-203ENST00000449049 FAM20AQ96MK3 541 aa15.91■□□□□ 0.14
SHMT2-203ENST00000449049 SYNGAP1Q96PV0 1343 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 PRPF40AO75400 957 aaKnown RBP15.9■□□□□ 0.14
SHMT2-203ENST00000449049 ARP10275 920 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 IL17AQ16552 155 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 SLFN12Q8IYM2 578 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 KCNH7Q9NS40 1196 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 LMBRD1Q9NUN5 540 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 CASP8AP2Q9UKL3 1982 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
SHMT2-203ENST00000449049 DDX11L8A8MPP1 907 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 MAFGO15525 162 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 CUTAO60888 179 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 GNRH1P01148 92 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 IGHA2P01877 340 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
SHMT2-203ENST00000449049 ICAM3P32942 547 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 GNPTABQ3T906 1256 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 ZNF296Q8WUU4 475 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-203ENST00000449049 SLC5A5Q92911 643 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 TINF2Q9BSI4 451 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
SHMT2-203ENST00000449049 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 DOCK3Q8IZD9 2030 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 CYP2B6P20813 491 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 GRIN1Q05586 938 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 SEMA3FQ13275 785 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 OLFML2BQ68BL8 750 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 ADALQ6DHV7 355 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 DTHD1Q6ZMT9 781 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 CDHR1Q96JP9 859 aa15.89■□□□□ 0.13
SHMT2-203ENST00000449049 SPATA31C2B4DYI2 1134 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 TXKP42681 527 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 PRKCZQ05513 592 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 CLIC6Q96NY7 704 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 ZNF577Q9BSK1 485 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 KATNBL1Q9H079 304 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 IPO5O00410 1097 aaKnown RBP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 GADD45BO75293 160 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 FLT3LGP49771 235 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 GJA10Q969M2 543 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 RIT2Q99578 217 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-203ENST00000449049 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
SHMT2-203ENST00000449049 MCM3APO60318 1980 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 A0A1W2PQ27 194 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 A0A1W2PQ64 194 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 A0A1W2PQD8 194 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 MARCH6O60337 910 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 PSMD10O75832 226 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-203ENST00000449049 HOXD10P28358 340 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 LONP1P36776 959 aaKnown RBP15.87■□□□□ 0.13
SHMT2-203ENST00000449049 UBE2HP62256 183 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 NFKBIBQ15653 356 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 CCL14Q16627 93 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 FBXO16Q8IX29 292 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-203ENST00000449049 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 CSRNP2Q9H175 543 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 PCDHA12Q9UN75 941 aa15.87■□□□□ 0.13
SHMT2-203ENST00000449049 TECP42680 631 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 ITGB3BPQ13352 177 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-203ENST00000449049 IRF5Q13568 498 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 ARHGEF6Q15052 776 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 SEPT14Q6ZU15 432 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 DHX15O43143 795 aaKnown RBP15.86■□□□□ 0.13
SHMT2-203ENST00000449049 ATP9AO75110 1047 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 TGFB3P10600 412 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 KCNA2P16389 499 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 PTMSP20962 102 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 PDIA5Q14554 519 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 KCNV1Q6PIU1 500 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 SHC4Q6S5L8 630 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 AK8Q96MA6 479 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 ABHD16BQ9H3Z7 469 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 TBC1D22BQ9NU19 505 aa15.86■□□□□ 0.13
SHMT2-203ENST00000449049 NFASCO94856 1347 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 RBM47A0AV96 593 aaKnown RBP15.85■□□□□ 0.13
SHMT2-203ENST00000449049 GOLGA6L4A6NEF3 574 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 CMA1P23946 247 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 RESP18Q5W5W9 173 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 TAPT1Q6NXT6 567 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 B3GNT9Q6UX72 402 aa15.85■□□□□ 0.13
SHMT2-203ENST00000449049 OTOP1Q7RTM1 612 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms