RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 PCNX4Q63HM2 1172 aa27.59■■■□□ 2.01
MRPL28-205ENST00000447696 TRPV6Q9H1D0 765 aa27.59■■■□□ 2.01
MRPL28-205ENST00000447696 FOSL2P15408 326 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 ICAM3P32942 547 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 MRPS9P82933 396 aaKnown RBP27.58■■■□□ 2.01
MRPL28-205ENST00000447696 APOBRQ0VD83 1088 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 NBPF20Q3BBV1 942 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 CELF3Q5SZQ8 465 aaKnown RBP27.58■■■□□ 2.01
MRPL28-205ENST00000447696 MYLIPQ8WY64 445 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 GPKOWQ92917 476 aaPredicted RBP eCLIP27.58■■■□□ 2.01
MRPL28-205ENST00000447696 HIPK3Q9H422 1215 aa27.58■■■□□ 2.01
MRPL28-205ENST00000447696 NAP1L2Q9ULW6 460 aaPredicted RBP27.58■■■□□ 2.01
MRPL28-205ENST00000447696 HOXD8P13378 290 aaPredicted RBP27.57■■■□□ 2
MRPL28-205ENST00000447696 UBA1P22314 1058 aaKnown RBP27.57■■■□□ 2
MRPL28-205ENST00000447696 CDC27P30260 824 aa27.57■■■□□ 2
MRPL28-205ENST00000447696 PPIGQ13427 754 aaKnown RBP eCLIP27.57■■■□□ 22e-6■■■□□ 16.8
MRPL28-205ENST00000447696 MYSM1Q5VVJ2 828 aa27.57■■■□□ 2
MRPL28-205ENST00000447696 WWC2Q6AWC2 1192 aa27.57■■■□□ 2
MRPL28-205ENST00000447696 TMEM199Q8N511 208 aa27.57■■■□□ 2
MRPL28-205ENST00000447696 TTYH1Q9H313 450 aaPredicted RBP27.57■■■□□ 2
MRPL28-205ENST00000447696 V9GY48 417 aaPredicted RBP27.57■■■□□ 2
MRPL28-205ENST00000447696 GGPS1O95749 300 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 EPHB4P54760 987 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 RUFY3Q7L099 469 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 NOC4LQ9BVI4 516 aaKnown RBP27.56■■■□□ 2
MRPL28-205ENST00000447696 PPP1R12CQ9BZL4 782 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 TM6SF1Q9BZW5 370 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 ZSWIM6Q9HCJ5 1215 aa27.56■■■□□ 2
MRPL28-205ENST00000447696 FIBPO43427 364 aa27.55■■■□□ 2
MRPL28-205ENST00000447696 EVCP57679 992 aa27.55■■■□□ 2
MRPL28-205ENST00000447696 FAM47CQ5HY64 1035 aa27.55■■■□□ 2
MRPL28-205ENST00000447696 KAT2BQ92831 832 aa27.55■■■□□ 2
MRPL28-205ENST00000447696 SPATA33Q96N06 139 aa27.55■■■□□ 2
MRPL28-205ENST00000447696 SPTBN5Q9NRC6 3674 aaKnown RBP27.55■■■□□ 2
MRPL28-205ENST00000447696 SPDYE3A6NKU9 549 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 SPATA31C2B4DYI2 1134 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 PPFIA4O75335 1185 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 ADD1P35611 737 aaKnown RBP27.54■■■□□ 2
MRPL28-205ENST00000447696 NAPAP54920 295 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 SP2Q02086 613 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 SESTD1Q86VW0 696 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 ZFP91Q96JP5 570 aaPredicted RBP27.54■■■□□ 2
MRPL28-205ENST00000447696 KATNAL1Q9BW62 490 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 GLT8D2Q9H1C3 349 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 TRMT13Q9NUP7 481 aaKnown RBP27.54■■■□□ 2
MRPL28-205ENST00000447696 BARHL2Q9NY43 387 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 CYP46A1Q9Y6A2 500 aa27.54■■■□□ 2
MRPL28-205ENST00000447696 STXBP3O00186 592 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 F2P00734 622 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 CYP2C18P33260 490 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 NEDD9Q14511 834 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 UBE2SQ16763 222 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 NLRX1Q86UT6 975 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 EHMT1Q9H9B1 1298 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 RIC8AQ9NPQ8 531 aa27.53■■■□□ 2
MRPL28-205ENST00000447696 CSF2RAP15509 400 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 SEMA3FQ13275 785 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 HSDL1Q3SXM5 330 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 TYW1BQ6NUM6 668 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 RNPC3Q96LT9 517 aaKnown RBP27.52■■■□□ 2
MRPL28-205ENST00000447696 MLXIPQ9HAP2 919 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 RTEL1Q9NZ71 1219 aa27.52■■■□□ 2
MRPL28-205ENST00000447696 ADCY7P51828 1080 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 PFKFB3Q16875 520 aaPredicted RBP27.51■■□□□ 1.99
MRPL28-205ENST00000447696 METTL7BQ6UX53 244 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 GPRASP2Q96D09 838 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 CDHR1Q96JP9 859 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 SENP7Q9BQF6 1050 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 PCDHA6Q9UN73 950 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 PCDHA8Q9Y5H6 950 aa27.51■■□□□ 1.99
MRPL28-205ENST00000447696 UMODL1Q5DID0 1318 aa27.5■■□□□ 1.99
MRPL28-205ENST00000447696 FOSP01100 380 aaPredicted RBP27.5■■□□□ 1.99
MRPL28-205ENST00000447696 PSEN2P49810 448 aa27.5■■□□□ 1.99
MRPL28-205ENST00000447696 PSRC1Q6PGN9 363 aaPredicted RBP27.5■■□□□ 1.99
MRPL28-205ENST00000447696 IL23AQ9NPF7 189 aa27.5■■□□□ 1.99
MRPL28-205ENST00000447696 EYSQ5T1H1 3165 aa27.5■■□□□ 1.99
MRPL28-205ENST00000447696 HAS3O00219 553 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 EIF5BO60841 1220 aaKnown RBP27.49■■□□□ 1.99
MRPL28-205ENST00000447696 ZNF286BP0CG31 522 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 CYP2C9P11712 490 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 SCG2P13521 617 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 PDIA3P30101 505 aaKnown RBP27.49■■□□□ 1.99
MRPL28-205ENST00000447696 TOB2Q14106 344 aaPredicted RBP27.49■■□□□ 1.99
MRPL28-205ENST00000447696 TJAP1Q5JTD0 557 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 GIMAP8Q8ND71 665 aaPredicted RBP27.49■■□□□ 1.99
MRPL28-205ENST00000447696 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.49■■□□□ 1.991e-8■■■■■ 29.6
MRPL28-205ENST00000447696 WNT8AQ9H1J5 351 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 PRUNE2Q8WUY3 3088 aa27.49■■□□□ 1.99
MRPL28-205ENST00000447696 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.48■■□□□ 1.99
MRPL28-205ENST00000447696 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.48■■□□□ 1.99
MRPL28-205ENST00000447696 PRPF3O43395 683 aaKnown RBP27.48■■□□□ 1.99
MRPL28-205ENST00000447696 CHMP4BP1P59074 171 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 MFSD10Q14728 455 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 TMEM240Q5SV17 173 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 C16orf59Q7L2K0 433 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 NOD1Q9Y239 953 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 UBIAD1Q9Y5Z9 338 aa27.48■■□□□ 1.99
MRPL28-205ENST00000447696 MYH7BA7E2Y1 1941 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 ESYT2A0FGR8 921 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 SMCO2A6NFE2 343 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms