RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 H0YGN5 161 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 FLOT1O75955 427 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 GLI1P08151 1106 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 BCAMP50895 628 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 ZNF131P52739 623 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 ZBED6P86452 979 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 PPARAQ07869 468 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 MTMR3Q13615 1198 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 ANKRD23Q86SG2 305 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 SPATA5Q8NB90 893 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 ZNF507Q8TCN5 953 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 NOC3LQ8WTT2 800 aaKnown RBP21.08■□□□□ 0.97
HMGA1-205ENST00000447654 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.08■□□□□ 0.972e-7■□□□□ 9.5
HMGA1-205ENST00000447654 NFS1Q9Y697 457 aa21.08■□□□□ 0.97
HMGA1-205ENST00000447654 ARAP2Q8WZ64 1704 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 PDS5AQ29RF7 1337 aaKnown RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 MACROD2A1Z1Q3 448 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 RNF8O76064 485 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 NQO1P15559 274 aaKnown RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 TOB1P50616 345 aaPredicted RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 CUL3Q13618 768 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 NFXL1Q6ZNB6 911 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 NCAPG2Q86XI2 1143 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 RAB11FIP4Q86YS3 637 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 NGLY1Q96IV0 654 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 EPAS1Q99814 870 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 RBM12Q9NTZ6 932 aaKnown RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 ATRNO75882 1429 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 E7ENQ6 273 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 F8W031 263 aaPredicted RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 MATR3P43243 847 aaKnown RBP eCLIP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 DNM2P50570 870 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 ERFEQ4G0M1 354 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 ANKRD20A2Q5SQ80 823 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 ANKRD20A1Q5TYW2 823 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 ANKRD20A3Q5VUR7 823 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 APBB1IPQ7Z5R6 666 aaPredicted RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 TBC1D10CQ8IV04 446 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 AIFM3Q96NN9 605 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 PYM1Q9BRP8 204 aaKnown RBP21.07■□□□□ 0.96
HMGA1-205ENST00000447654 PANK4Q9NVE7 773 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 CTNNAL1Q9UBT7 734 aa21.07■□□□□ 0.96
HMGA1-205ENST00000447654 AFF2P51816 1311 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ATP2A2P16615 1042 aaKnown RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 IARSP41252 1262 aaKnown RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 GUCY2DQ02846 1103 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 CUL1Q13616 776 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 UBE3CQ15386 1083 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 CCDC152Q4G0S7 254 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 FIGNQ5HY92 759 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ERMARDQ5T6L9 678 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 PIGWQ7Z7B1 504 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 NAF1Q96HR8 494 aaKnown RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 HINFPQ9BQA5 517 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 TTYH3Q9C0H2 523 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 LMCD1Q9NZU5 365 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ANGEL1Q9UNK9 670 aaKnown RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 A0A1W2PQJ5 194 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ALDH3A1P30838 453 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ABL2P42684 1182 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 GRIN1Q05586 938 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 GBP7Q8N8V2 638 aaPredicted RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ATL2Q8NHH9 583 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 MMTAG2Q9BU76 263 aaKnown RBP21.06■□□□□ 0.96
HMGA1-205ENST00000447654 POLD4Q9HCU8 107 aa21.06■□□□□ 0.96
HMGA1-205ENST00000447654 ZNF213O14771 459 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 ATP2C2O75185 946 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 LCA5LO95447 670 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 UQCRFS1P1P0C7P4 283 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 SLC5A1P13866 664 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 CHRNDQ07001 517 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 LRRC23Q53EV4 343 aaPredicted RBP21.05■□□□□ 0.96
HMGA1-205ENST00000447654 LMNTD2Q8IXW0 634 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 FAM129AQ9BZQ8 928 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 RMND1Q9NWS8 449 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 TFR2Q9UP52 801 aa21.05■□□□□ 0.96
HMGA1-205ENST00000447654 MMP1P03956 469 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 VPS72Q15906 364 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 BICDL1Q6ZP65 573 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 ZNF513Q8N8E2 541 aaPredicted RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 CASKIN2Q8WXE0 1202 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 IFT81Q8WYA0 676 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 RBM41Q96IZ5 413 aaKnown RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 CSRNP2Q9H175 543 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 ISCUQ9H1K1 167 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 BCORQ6W2J9 1755 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 BMP15O95972 392 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 PYGLP06737 847 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 MYBP10242 640 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 ZNF844Q08AG5 666 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 NTRK3Q16288 839 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 ODF2Q5BJF6 829 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 TBC1D1Q86TI0 1168 aaPredicted RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 RNF10Q8N5U6 811 aaKnown RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 TEKT4Q8WW24 435 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 XPO6Q96QU8 1125 aaKnown RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 STRBPQ96SI9 672 aaKnown RBP21.04■□□□□ 0.96
HMGA1-205ENST00000447654 WDR35Q9P2L0 1181 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms