RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 KRT25Q7Z3Z0 450 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 C12orf42Q96LP6 360 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 SPATC1LQ9H0A9 340 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 PKD2L1Q9P0L9 805 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 IFNKQ9P0W0 207 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 SASH3O75995 380 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 TBC1D8O95759 1140 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 ICAM1P05362 532 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 TAL1P17542 331 aaPredicted RBP6.64□□□□□ -1.35
PROM1-201ENST00000447510 ERCC3P19447 782 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 CHMP4BP1P59074 171 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 IFNL1Q8IU54 200 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 REM2Q8IYK8 340 aaPredicted RBP6.64□□□□□ -1.35
PROM1-201ENST00000447510 CEP57L1Q8IYX8 460 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 CCDC43Q96MW1 224 aaKnown RBP6.64□□□□□ -1.35
PROM1-201ENST00000447510 ZSCAN16Q9H4T2 348 aaPredicted RBP6.64□□□□□ -1.35
PROM1-201ENST00000447510 RIOX1Q9H6W3 641 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 BARHL2Q9NY43 387 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 ADD3Q9UEY8 706 aaKnown RBP6.64□□□□□ -1.35
PROM1-201ENST00000447510 PASKQ96RG2 1323 aa6.64□□□□□ -1.35
PROM1-201ENST00000447510 WDR90Q96KV7 1748 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 FOSP01100 380 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 RDXP35241 583 aaKnown RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 ERVK-24P63145 666 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 BAATQ14032 418 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 GALNT17Q6IS24 598 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 NYAP1Q6ZVC0 841 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 TSKSQ9UJT2 592 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 CFAP45Q9UL16 551 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 PCDHA4Q9UN74 947 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 CEP131Q9UPN4 1083 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 FAN1Q9Y2M0 1017 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 STK36Q9NRP7 1315 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 TESPA1A2RU30 521 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 CYTH3O43739 400 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 PEX10O60683 326 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 SNHG28P0DPA3 235 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 EIF2AK2P19525 551 aaKnown RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 HOXD10P28358 340 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 ME1P48163 572 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 MAP2K1Q02750 393 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 PDE4DQ08499 809 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 TKFCQ3LXA3 575 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 EEPD1Q7L9B9 569 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 JMYQ8N9B5 988 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 TMEM87AQ8NBN3 555 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 UIMC1Q96RL1 719 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 SLC38A10Q9HBR0 1119 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 SLC24A3Q9HC58 644 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 FAM217BQ9NTX9 383 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 CTDNEP1O95476 244 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 RHOXF2BP0C7M4 288 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 CYP2B6P20813 491 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 HOXA7P31268 230 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 MCM7P33993 719 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 SP4Q02446 784 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 PPP2R3AQ06190 1150 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 KARSQ15046 597 aaKnown RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 INF2Q27J81 1249 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 CHST13Q8NET6 341 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 RMDN3Q96TC7 470 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 RHOXF2Q9BQY4 288 aa6.63□□□□□ -1.35
PROM1-201ENST00000447510 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
PROM1-201ENST00000447510 MYPNQ86TC9 1320 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 CCNT1O60563 726 aaKnown RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 EIF3JO75822 258 aaKnown RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 SERPINC1P01008 464 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 MYCP01106 439 aaPredicted RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 CNGA1P29973 690 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 FCGRTP55899 365 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 GSDMDP57764 484 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 CCZ1BP86790 482 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 CCZ1P86791 482 aaPredicted RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 NR5A1Q13285 461 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 ZNF174Q15697 407 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 NTRK3Q16288 839 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 STX1AQ16623 288 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 CC2D1AQ6P1N0 951 aaPredicted RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 BTNL9Q6UXG8 535 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 MOV10L1Q9BXT6 1211 aaKnown RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 CLSTN2Q9H4D0 955 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 MROH8Q9H579 483 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 SH3GLB2Q9NR46 395 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 RTEL1Q9NZ71 1219 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 SAMM50Q9Y512 469 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 FRMD3A2A2Y4 597 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 TPM1P09493 284 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 MAPK4P31152 587 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 TMEM132BQ14DG7 1078 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 PPP1R18Q6NYC8 613 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 TRMT1LQ7Z2T5 733 aaKnown RBP6.62□□□□□ -1.35
PROM1-201ENST00000447510 BRAPQ7Z569 592 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
PROM1-201ENST00000447510 EXOC4Q96A65 974 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms