RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 KRT71Q3SY84 523 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 SLC10A5Q5PT55 438 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 PPP4R4Q6NUP7 873 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 CATSPER4Q7RTX7 472 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 MDM1Q8TC05 714 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 HERVK_113Q902F9 699 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 CDCA7LQ96GN5 454 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 HGH1Q9BTY7 390 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 PGAP2Q9UHJ9 254 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 TSC22D4Q9Y3Q8 395 aa9.45□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC163A0A0D9SF12 145 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 A6NJY4 79 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 KMOO15229 486 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 N4BP1O75113 896 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 DGKIO75912 1065 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 THOP1P52888 689 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 ITGB3BPQ13352 177 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 ADAM9Q13443 819 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC183Q5T5S1 534 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 DUS1LQ6P1R4 473 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC81Q6ZN84 652 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CEP68Q76N32 757 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NCSTNQ92542 709 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NRBF2Q96F24 287 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 MED30Q96HR3 178 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 FGD4Q96M96 766 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 C12orf10Q9HB07 376 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 TTF2Q9UNY4 1162 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NOX1Q9Y5S8 564 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 ATP10AO60312 1499 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 WDR7Q9Y4E6 1490 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 PHLPP2Q6ZVD8 1323 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 hCG_1984214I3L0E3 225 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 YKT6O15498 198 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CYP2C9P11712 490 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 PLTPP55058 493 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 RELQ04864 619 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 RIPK1Q13546 671 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 ZC3H12BQ5HYM0 836 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 LDLRAD1Q5T700 205 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 SNX30Q5VWJ9 437 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 SCUBE1Q8IWY4 988 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 LSMEM1Q8N8F7 131 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC148Q8NFR7 591 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 FERD3LQ96RJ6 166 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NAT10Q9H0A0 1025 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NOD2Q9HC29 1040 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 UBN1Q9NPG3 1134 aa9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC177Q9NQR7 707 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 CRNNQ9UBG3 495 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 SEC63Q9UGP8 760 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-203ENST00000447025 NPATQ14207 1427 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 ITIH6Q6UXX5 1313 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 E9PMD0 336 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 MCF2LO15068 1137 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 EIF3HO15372 352 aaKnown RBP eCLIP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TMCC2O75069 709 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 ATP6V1G2O95670 118 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 NLRP6P59044 892 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 RUNX1T1Q06455 604 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 NFX1Q12986 1120 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PPP2R5CQ13362 524 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 XRCC4Q13426 336 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 SPIDRQ14159 915 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 STK11Q15831 433 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PDCD4Q53EL6 469 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 IGSF11Q5DX21 431 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC83Q8IWF9 413 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CADM3Q8N126 398 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 AIFM2Q9BRQ8 373 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 SIKE1Q9BRV8 207 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 EHMT1Q9H9B1 1298 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 SCPEP1Q9HB40 452 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 INTUQ9ULD6 942 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CDC42BPAQ5VT25 1732 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PLEKHH2Q8IVE3 1493 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 ENPP3O14638 875 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 INMTO95050 263 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 OXSR1O95747 527 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms