RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 DIAPH3Q9NSV4 1193 aa28.37■■■□□ 2.13
PMS1-214ENST00000446877 AMHP03971 560 aa28.36■■■□□ 2.13
PMS1-214ENST00000446877 ZNF200P98182 395 aaPredicted RBP28.36■■■□□ 2.13
PMS1-214ENST00000446877 IMMTQ16891 758 aaKnown RBP28.36■■■□□ 2.13
PMS1-214ENST00000446877 MYSM1Q5VVJ2 828 aa28.36■■■□□ 2.13
PMS1-214ENST00000446877 KRT23Q9C075 422 aa28.36■■■□□ 2.13
PMS1-214ENST00000446877 UBE2ZQ9H832 354 aaPredicted RBP28.36■■■□□ 2.13
PMS1-214ENST00000446877 MAP3K20Q9NYL2 800 aaKnown RBP28.36■■■□□ 2.13
PMS1-214ENST00000446877 THPOP40225 353 aa28.35■■■□□ 2.13
PMS1-214ENST00000446877 HSD17B4P51659 736 aa28.35■■■□□ 2.13
PMS1-214ENST00000446877 CELF3Q5SZQ8 465 aaKnown RBP28.35■■■□□ 2.13
PMS1-214ENST00000446877 TRAF7Q6Q0C0 670 aa28.35■■■□□ 2.13
PMS1-214ENST00000446877 WNT8BQ93098 351 aa28.35■■■□□ 2.13
PMS1-214ENST00000446877 CTNNA3Q9UI47 895 aa28.35■■■□□ 2.13
PMS1-214ENST00000446877 TRIP12Q14669 1992 aaPredicted RBP28.35■■■□□ 2.13
PMS1-214ENST00000446877 RSPH10B2B2RC85 870 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 SORBS3O60504 671 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 RSPH10BP0C881 870 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 MBTPS1Q14703 1052 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 IFIT1BQ5T764 474 aaKnown RBP28.34■■■□□ 2.13
PMS1-214ENST00000446877 PDCD2LQ9BRP1 358 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 CNNM2Q9H8M5 875 aa28.34■■■□□ 2.13
PMS1-214ENST00000446877 HIP1O00291 1037 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 GPR37L1O60883 481 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 GGPS1O95749 300 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 HOXD8P13378 290 aaPredicted RBP28.33■■■□□ 2.13
PMS1-214ENST00000446877 HSDL1Q3SXM5 330 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 B4GALNT3Q6L9W6 998 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.33■■■□□ 2.13
PMS1-214ENST00000446877 STOX1Q6ZVD7 989 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 VSIG10LQ86VR7 867 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 MYOCDQ8IZQ8 938 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 FBXO22Q8NEZ5 403 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 DBF4BQ8NFT6 615 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 MLXIPQ9HAP2 919 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 PCDHA1Q9Y5I3 950 aa28.33■■■□□ 2.13
PMS1-214ENST00000446877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.32■■■□□ 2.12
PMS1-214ENST00000446877 KLRF2D3W0D1 207 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 TGFB3P10600 412 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 KCNA5P22460 613 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 GHRHRQ02643 423 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 SERINC5Q86VE9 423 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 SAMD3Q8N6K7 520 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 DSCC1Q9BVC3 393 aa28.32■■■□□ 2.12
PMS1-214ENST00000446877 C17orf102A2RUQ5 167 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 RGS20O76081 388 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 HOXA13P31271 388 aaPredicted RBP28.31■■■□□ 2.12
PMS1-214ENST00000446877 TRAF1Q13077 416 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 PTPROQ16827 1216 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 LEXMQ3ZCV2 418 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 STAG2Q8N3U4 1231 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 KHSRPQ92945 711 aaKnown RBP eCLIP28.31■■■□□ 2.12
PMS1-214ENST00000446877 C17orf80Q9BSJ5 609 aa28.31■■■□□ 2.12
PMS1-214ENST00000446877 PI4K2BG5E9Z4 385 aa28.3■■■□□ 2.12
PMS1-214ENST00000446877 OPLAHO14841 1288 aa28.3■■■□□ 2.12
PMS1-214ENST00000446877 ZBTB5O15062 677 aa28.3■■■□□ 2.12
PMS1-214ENST00000446877 CCND2P30279 289 aa28.3■■■□□ 2.12
PMS1-214ENST00000446877 ATP6V0A1Q93050 837 aa28.3■■■□□ 2.12
PMS1-214ENST00000446877 RWDD1Q9H446 243 aaPredicted RBP28.3■■■□□ 2.12
PMS1-214ENST00000446877 FAM86C2PA6NEL3 165 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 HOXD11P31277 338 aaPredicted RBP28.29■■■□□ 2.12
PMS1-214ENST00000446877 HIC1Q14526 733 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 PGM5Q15124 567 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 GJD3Q8N144 294 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 SEPT8Q92599 483 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 SAMD11Q96NU1 681 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 C16orf70Q9BSU1 422 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 CD320Q9NPF0 282 aa28.29■■■□□ 2.12
PMS1-214ENST00000446877 H3BRB1 525 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 GCOM1H8Y6P7 765 aaPredicted RBP28.28■■■□□ 2.12
PMS1-214ENST00000446877 POLR2MP0CAP2 368 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 UBA1P22314 1058 aaKnown RBP28.28■■■□□ 2.12
PMS1-214ENST00000446877 HTRA4P83105 476 aaPredicted RBP28.28■■■□□ 2.12
PMS1-214ENST00000446877 SP2Q02086 613 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 PLEKHG4Q58EX7 1191 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 CHD1LQ86WJ1 897 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 PLEKHM2Q8IWE5 1019 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 OSBPL3Q9H4L5 887 aa28.28■■■□□ 2.12
PMS1-214ENST00000446877 TUT1Q9H6E5 874 aaKnown RBP28.28■■■□□ 2.12
PMS1-214ENST00000446877 NOP56O00567 594 aaKnown RBP28.27■■■□□ 2.12
PMS1-214ENST00000446877 PPP1R11O60927 126 aaPredicted RBP28.27■■■□□ 2.12
PMS1-214ENST00000446877 SSTR3P32745 418 aaPredicted RBP28.27■■■□□ 2.12
PMS1-214ENST00000446877 FCHSD1Q86WN1 690 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 HOMER1Q86YM7 354 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 FAM178BQ8IXR5 827 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 SMC5Q8IY18 1101 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 MRPL38Q96DV4 380 aaKnown RBP28.27■■■□□ 2.12
PMS1-214ENST00000446877 MTMR8Q96EF0 704 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 YME1L1Q96TA2 773 aa28.27■■■□□ 2.12
PMS1-214ENST00000446877 AAMPQ13685 434 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 PUS10Q3MIT2 529 aaKnown RBP28.26■■■□□ 2.11
PMS1-214ENST00000446877 EPC2Q52LR7 807 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 PTCRAQ6ISU1 281 aaPredicted RBP28.26■■■□□ 2.11
PMS1-214ENST00000446877 IL31RAQ8NI17 732 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.26■■■□□ 2.11
PMS1-214ENST00000446877 SP7Q8TDD2 431 aaPredicted RBP28.26■■■□□ 2.11
PMS1-214ENST00000446877 C11orf16Q9NQ32 467 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 MAD2L2Q9UI95 211 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 BRWD1Q9NSI6 2320 aa28.26■■■□□ 2.11
PMS1-214ENST00000446877 SMIM10L2AP0DMW4 78 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms