RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RNF14Q9UBS8 474 aa9.3□□□□□ -0.92
PTPN3-204ENST00000446349 TROVE2P10155 538 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPN3-204ENST00000446349 DLATP10515 647 aaKnown RBP9.3□□□□□ -0.92
PTPN3-204ENST00000446349 AP3M2P53677 418 aa9.3□□□□□ -0.92
PTPN3-204ENST00000446349 KRBA2Q6ZNG9 492 aa9.3□□□□□ -0.92
PTPN3-204ENST00000446349 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
PTPN3-204ENST00000446349 C19orf81C9J6K1 198 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 STXBP3O00186 592 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 AFPP02771 609 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PPM1KQ8N3J5 372 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 HAUS4Q9H6D7 363 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 K7ERI5 159 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 CYP2E1P05181 493 aaPredicted RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 APBA1Q02410 837 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 LPAR1Q92633 364 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 TBC1D8O95759 1140 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 CDK8P49336 464 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 ZNF75DP51815 510 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 SCYL2Q6P3W7 929 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PHLDB2Q86SQ0 1253 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 JRKLQ9Y4A0 524 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 DAAM1Q9Y4D1 1078 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PPFIA4O75335 1185 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 LONRF2Q1L5Z9 754 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PNMA8AQ86V59 439 aaPredicted RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 FNBP4Q8N3X1 1017 aaPredicted RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 A0A0D9SFI3 127 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 H7C1W4 665 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 KIAA0391O15091 583 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 ECE2O60344 883 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 HOXC6P09630 235 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 DDX5P17844 614 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 PDIA3P30101 505 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 ECE1P42892 770 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 TSPY1Q01534 308 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 ITKQ08881 620 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 EPSTI1Q96J88 318 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 NUF2Q9BZD4 464 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 MAP3K20Q9NYL2 800 aaKnown RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 KRT15P19012 456 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 COG7P83436 770 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 MB21D1Q8N884 522 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 SERTAD1Q9UHV2 236 aa9.29□□□□□ -0.92
PTPN3-204ENST00000446349 FARP1Q9Y4F1 1045 aaPredicted RBP9.29□□□□□ -0.92
PTPN3-204ENST00000446349 BFSP1Q12934 665 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 DRP2Q13474 957 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 U2AF1L4Q8WU68 220 aaKnown RBP9.28□□□□□ -0.92
PTPN3-204ENST00000446349 NNMTP40261 264 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 FAM186BQ8IYM0 893 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 MAPK8IP1Q9UQF2 711 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 KIF28PB7ZC32 967 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 PFKFB1P16118 471 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 ME3Q16798 604 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 MAN2A1Q16706 1144 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 DHX38Q92620 1227 aaKnown RBP9.28□□□□□ -0.92
PTPN3-204ENST00000446349 DBNLQ9UJU6 430 aaKnown RBP9.28□□□□□ -0.92
PTPN3-204ENST00000446349 UTYO14607 1347 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 MCF2LO15068 1137 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 RNF219Q5W0B1 726 aaPredicted RBP9.28□□□□□ -0.92
PTPN3-204ENST00000446349 SYT10Q6XYQ8 523 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 MICAL1Q8TDZ2 1067 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 C21orf2O43822 256 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 SATB1Q01826 763 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 BEST2Q8NFU1 509 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 TTLL11Q8NHH1 800 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 RECQLP46063 649 aaPredicted RBP9.28□□□□□ -0.92
PTPN3-204ENST00000446349 KRT39Q6A163 491 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 STYK1Q6J9G0 422 aa9.28□□□□□ -0.92
PTPN3-204ENST00000446349 RNF40O75150 1001 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 SLC39A14Q15043 492 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 NME8Q8N427 588 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 MMP19Q99542 508 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 SCINQ9Y6U3 715 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 SASH1O94885 1247 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms