RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 HOMER2Q9NSB8 354 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 LUC7L2Q9Y383 392 aaKnown RBP18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 BICDL2A1A5D9 508 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 OPLAHO14841 1288 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 PLA2G4BP0C869 781 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 HERC4Q5GLZ8 1057 aaPredicted RBP18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 ZNF569Q5MCW4 686 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 THAP9Q9H5L6 903 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 MAGEF1Q9HAY2 307 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 PANK4Q9NVE7 773 aa18.72■□□□□ 0.59
LAPTM4B-201ENST00000445593 COASYQ13057 564 aa18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 PDIA5Q14554 519 aa18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 EEF1GP26641 437 aaKnown RBP18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 ANKRD7Q92527 254 aa18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 RGL1Q9NZL6 768 aa18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
LAPTM4B-201ENST00000445593 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.58
LAPTM4B-201ENST00000445593 GMCL1Q96IK5 515 aa18.71■□□□□ 0.58
LAPTM4B-201ENST00000445593 TRERF1Q96PN7 1200 aa18.71■□□□□ 0.58
LAPTM4B-201ENST00000445593 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 GMCL1P1Q8NEA9 526 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 FAM151AQ8WW52 585 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 SFI1A8K8P3 1242 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 DDX39AO00148 427 aaKnown RBP18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 TRAF5O00463 557 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 GCFC2P16383 781 aaKnown RBP18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 TMEM119Q4V9L6 283 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 GUCA1BQ9UMX6 200 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
LAPTM4B-201ENST00000445593 WNT10BO00744 389 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 TSR1Q2NL82 804 aaKnown RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 FAM26FQ5R3K3 315 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 CATSPER3Q86XQ3 398 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 PIGOQ8TEQ8 1089 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 CRACR2AQ9BSW2 395 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 HERC5Q9UII4 1024 aaKnown RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 ATRNL1Q5VV63 1379 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 ZBTB39O15060 712 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 ENOX2Q16206 610 aaKnown RBP18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 SPDYE2Q495Y8 402 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
LAPTM4B-201ENST00000445593 PHLPP2Q6ZVD8 1323 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 EPHB6O15197 1021 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 MSH4O15457 936 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 ORC2Q13416 577 aaPredicted RBP18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 CTTNQ14247 550 aaKnown RBP18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 FBXO38Q6PIJ6 1188 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 CYP26C1Q6V0L0 522 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 SAMD7Q7Z3H4 446 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 ZNF507Q8TCN5 953 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 GMLQ99445 158 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 KCNMB3Q9NPA1 279 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 ITIH6Q6UXX5 1313 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 CYP27A1Q02318 531 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 APBA1Q02410 837 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 L2HGDHQ9H9P8 463 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 GOPCQ9HD26 462 aa18.68■□□□□ 0.58
LAPTM4B-201ENST00000445593 KIF5CO60282 957 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 DNM2P50570 870 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 RASA3Q14644 834 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 MIIPQ5JXC2 388 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 FKBP15Q5T1M5 1219 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 OR8K1Q8NGG5 319 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 JDP2Q8WYK2 163 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 MAP7D2Q96T17 732 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 RSPH10B2B2RC85 870 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 EML1O00423 815 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 PLEKP08567 350 aaPredicted RBP18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 RSPH10BP0C881 870 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 USP11P51784 963 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 CCDC40Q4G0X9 1142 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 TMTC1Q8IUR5 882 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 LENG9Q96B70 501 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 AGBL1Q96MI9 1066 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 BHMT2Q9H2M3 363 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 FAM170AA1A519 330 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 CASP5P51878 434 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 ETNPPLQ8TBG4 499 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 UBXN4Q92575 508 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 TMX2Q9Y320 296 aa18.67■□□□□ 0.58
LAPTM4B-201ENST00000445593 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 TPH2Q8IWU9 490 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms