RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 NLRP14Q86W24 1093 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 NRBF2Q96F24 287 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 CARD10Q9BWT7 1032 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 ANO9A1A5B4 782 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 KRT81Q14533 505 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 TOGARAM2Q6ZUX3 1019 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 PITPNM3Q9BZ71 974 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 INTUQ9ULD6 942 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 H0Y3Z8 333 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
SHANK3-203ENST00000445220 PDE8BO95263 885 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 GRAMD4Q6IC98 578 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 VTI1AQ96AJ9 217 aa20.18■□□□□ 0.82
SHANK3-203ENST00000445220 KIF1BO60333 1816 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 MYO1FO00160 1098 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 PDHA1P08559 390 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 RSBN1LQ6PCB5 846 aaPredicted RBP20.17■□□□□ 0.82
SHANK3-203ENST00000445220 FAM167BQ9BTA0 163 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 DR1Q01658 176 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 UNC5CLQ8IV45 518 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 THAP9Q9H5L6 903 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 BATF3Q9NR55 127 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.17■□□□□ 0.82
SHANK3-203ENST00000445220 SEMA3EO15041 775 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 MYL1P05976 194 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 KIF11P52732 1056 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 CYP27A1Q02318 531 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 ZMYM1Q5SVZ6 1142 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 C1orf112Q9NSG2 853 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 TBK1Q9UHD2 729 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 PCDHA12Q9UN75 941 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 TNKSO95271 1327 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 ZBTB22O15209 634 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 STAM2O75886 525 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 MT-ND3P03897 115 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 PDE1BQ01064 536 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 DRP2Q13474 957 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 CLEC17AQ6ZS10 378 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 SERPINI1Q99574 410 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 IRAK4Q9NWZ3 460 aa20.17■□□□□ 0.82
SHANK3-203ENST00000445220 CDAN1Q8IWY9 1227 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 SYT2Q8N9I0 419 aaPredicted RBP20.16■□□□□ 0.82
SHANK3-203ENST00000445220 COL4A3BPQ9Y5P4 624 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 MAD1L1Q9Y6D9 718 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 FLAD1Q8NFF5 587 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 CHURC1Q8WUH1 139 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 DYDC2Q96IM9 177 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
SHANK3-203ENST00000445220 NSFP46459 744 aaKnown RBP20.16■□□□□ 0.82
SHANK3-203ENST00000445220 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.16■□□□□ 0.82
SHANK3-203ENST00000445220 GSTA1P08263 222 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 GSTA2P09210 222 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 TPH2Q8IWU9 490 aa20.16■□□□□ 0.82
SHANK3-203ENST00000445220 EXOC1LA0A1B0GW35 172 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 LAD1O00515 517 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 CA4P22748 312 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 KAZNQ674X7 775 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 PPM1KQ8N3J5 372 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 CYTH2Q99418 400 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 TMEM60Q9H2L4 133 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 SERPING1P05155 500 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 CCDC144BQ3MJ40 725 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 BEND6Q5SZJ8 279 aaPredicted RBP20.15■□□□□ 0.82
SHANK3-203ENST00000445220 OLFM3Q96PB7 478 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 OSBPL1AQ9BXW6 950 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 GYG2O15488 501 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 DBNLQ9UJU6 430 aaKnown RBP20.15■□□□□ 0.82
SHANK3-203ENST00000445220 ZSCAN20P17040 1043 aaPredicted RBP20.15■□□□□ 0.82
SHANK3-203ENST00000445220 GRAMD1CQ8IYS0 662 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 ANKRD7Q92527 254 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 USP40Q9NVE5 1235 aa20.15■□□□□ 0.82
SHANK3-203ENST00000445220 USP27XA6NNY8 438 aa20.14■□□□□ 0.82
SHANK3-203ENST00000445220 UIMC1Q96RL1 719 aa20.14■□□□□ 0.82
SHANK3-203ENST00000445220 CYP21A2P08686 494 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 ELF1P32519 619 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 PNMA1Q8ND90 353 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 DTNBP1Q96EV8 351 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 FGD4Q96M96 766 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
SHANK3-203ENST00000445220 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 TRIM66O15016 1216 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 PPP2R2AP63151 447 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 SNX1Q13596 522 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 CCDC92Q53HC0 331 aaPredicted RBP20.14■□□□□ 0.81
SHANK3-203ENST00000445220 ABCC12Q96J65 1359 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 STX1BP61266 288 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 CHRNDQ07001 517 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 BPIFA3Q9BQP9 254 aa20.14■□□□□ 0.81
SHANK3-203ENST00000445220 JCADQ9P266 1359 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 MEFVO15553 781 aaPredicted RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 EEF1B2P24534 225 aaKnown RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 FKBP3Q00688 224 aaKnown RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 NSMCE1Q8WV22 266 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms