RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 FOCADQ5VW36 1801 aa6.11□□□□□ -1.43
CBX1-204ENST00000444685 GRIN2DO15399 1336 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 ABHD14A-ACY1A0A1B0GW23 586 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 GOLIM4O00461 696 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 CTAGE5O15320 804 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 ADCY6O43306 1168 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 IFIT2P09913 472 aaKnown RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 RARSP54136 660 aaKnown RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 CNTN2Q02246 1040 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 KCNMA1Q12791 1236 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 ZSCAN25Q6NSZ9 544 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 BLOC1S3Q6QNY0 202 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 RNF19BQ6ZMZ0 732 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 LCORLQ8N3X6 602 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 TRERF1Q96PN7 1200 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 WDR11Q9BZH6 1224 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 SUGCTQ9HAC7 445 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 TSR3Q9UJK0 312 aaKnown RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 INSL6Q9Y581 213 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 SLC4A4Q9Y6R1 1079 aa6.1□□□□□ -1.43
CBX1-204ENST00000444685 PTPRZ1P23471 2315 aaPredicted RBP6.1□□□□□ -1.43
CBX1-204ENST00000444685 GBF1Q92538 1859 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 CYP2D7A0A087X1C5 515 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 MINDY4BA8MYZ0 360 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 TMEM232C9JQI7 657 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 NKRFO15226 690 aaKnown RBP eCLIP6.09□□□□□ -1.43
CBX1-204ENST00000444685 PRKAB2O43741 272 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 LPXNO60711 386 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 MBD4O95243 580 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 TTLL1O95922 423 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 NDUFB10O96000 172 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 ALAS1P13196 640 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 IL9P15248 144 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 STAT2P52630 851 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 ERVK-21P61565 698 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 PTGISQ16647 500 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 DUSP28Q4G0W2 176 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 TMCO4Q5TGY1 634 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 BRICD5Q6PL45 260 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 FAM160B2Q86V87 743 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 SUGP1Q8IWZ8 645 aaKnown RBP6.09□□□□□ -1.43
CBX1-204ENST00000444685 SCUBE3Q8IX30 993 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 RPAP2Q8IXW5 612 aaPredicted RBP6.09□□□□□ -1.43
CBX1-204ENST00000444685 CLASRPQ8N2M8 674 aaKnown RBP6.09□□□□□ -1.43
CBX1-204ENST00000444685 FAM133AQ8N9E0 248 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 PNMA1Q8ND90 353 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 OR6J1Q8NGC5 347 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 CAGE1Q8TC20 777 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 GDPD5Q8WTR4 605 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.09□□□□□ -1.43
CBX1-204ENST00000444685 PDGFCQ9NRA1 345 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 RNF146Q9NTX7 359 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 TLR7Q9NYK1 1049 aaKnown RBP6.09□□□□□ -1.43
CBX1-204ENST00000444685 MTMR7Q9Y216 660 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 BRWD1Q9NSI6 2320 aa6.09□□□□□ -1.43
CBX1-204ENST00000444685 WDFY4Q6ZS81 3184 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 ASTN1O14525 1302 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 H3BQ06 376 aaPredicted RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 GJB5O95377 273 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 AMHP03971 560 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 APPP05067 770 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 SLC3A2P08195 630 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 BMP3P12645 472 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 TRIM27P14373 513 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 SELPP16109 830 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 SLC1A4P43007 532 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 WDR5P61964 334 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 PURAQ00577 322 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 TIGD5Q53EQ6 642 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 SLFN13Q68D06 897 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 DESI1Q6ICB0 168 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 TAPT1Q6NXT6 567 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 FAM117BQ6P1L5 589 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 CNKSR3Q6P9H4 555 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 CTR9Q6PD62 1173 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 NSMFQ6X4W1 530 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 ADHFE1Q8IWW8 467 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 FBXO16Q8IX29 292 aaPredicted RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 FTSJ3Q8IY81 847 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 STK11IPQ8N1F8 1099 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 LRRC47Q8N1G4 583 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 RGS22Q8NE09 1264 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 STAG1Q8WVM7 1258 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 MKL1Q969V6 931 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 MRPL38Q96DV4 380 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 USB1Q9BQ65 265 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 KATNBL1Q9H079 304 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 A1CFQ9NQ94 594 aaKnown RBP6.08□□□□□ -1.44
CBX1-204ENST00000444685 PAG1Q9NWQ8 432 aa6.08□□□□□ -1.44
CBX1-204ENST00000444685 ARPP21Q9UBL0 812 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms