RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 P2RX5Q93086 422 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 CDH22Q9UJ99 828 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 ANGPTL2Q9UKU9 493 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 CEP295Q9C0D2 2601 aa17.05■□□□□ 0.32
SYNCRIP-203ENST00000444272 WDFY3Q8IZQ1 3526 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 THPOP40225 353 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 BTG3Q14201 252 aaPredicted RBP17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.04■□□□□ 0.326e-7■□□□□ 11.3
SYNCRIP-203ENST00000444272 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 RC3H2Q9HBD1 1191 aaKnown RBP17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 MYH4Q9Y623 1939 aa17.04■□□□□ 0.32
SYNCRIP-203ENST00000444272 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 MMP3P08254 477 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 TKFCQ3LXA3 575 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 VARS2Q5ST30 1063 aaKnown RBP17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 AFG1LQ8WV93 481 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 ADD3Q9UEY8 706 aaKnown RBP17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 NBEAQ8NFP9 2946 aa17.03■□□□□ 0.32
SYNCRIP-203ENST00000444272 SP9P0CG40 484 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 TECP42680 631 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 KLHL23Q8NBE8 558 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 SCFD2Q8WU76 684 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
SYNCRIP-203ENST00000444272 KINO60870 393 aaKnown RBP17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 FDX1P10109 184 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 SYCE2Q6PIF2 218 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 SIX5Q8N196 739 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
SYNCRIP-203ENST00000444272 SMG1Q96Q15 3661 aaKnown RBP17■□□□□ 0.31
SYNCRIP-203ENST00000444272 ARIH2O95376 493 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 PSEN2P49810 448 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 DUSP6Q16828 381 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 LCORLQ8N3X6 602 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 NYAP2Q9P242 653 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 UNC79Q9P2D8 2635 aa17■□□□□ 0.31
SYNCRIP-203ENST00000444272 STK25O00506 426 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 KCNA4P22459 653 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 C12orf60Q5U649 245 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 TMED8Q6PL24 325 aaPredicted RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 MEIS3Q99687 375 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 FBXL21Q9UKT6 434 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 MRPL42Q9Y6G3 142 aaKnown RBP16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 MYH7BA7E2Y1 1941 aa16.99■□□□□ 0.31
SYNCRIP-203ENST00000444272 FSD2A1L4K1 749 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 PROS1P07225 676 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 CTSHP09668 335 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 PDE4DQ08499 809 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 BAATQ14032 418 aaPredicted RBP16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 HIC1Q14526 733 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 MFSD10Q14728 455 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 APBB2Q92870 758 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 CDCA3Q99618 268 aaPredicted RBP16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 ZMIZ1Q9ULJ6 1067 aa16.98■□□□□ 0.31
SYNCRIP-203ENST00000444272 LOC102724159A0A0B4J2E5 919 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 SNAP25P60880 206 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 MTX1Q13505 466 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 PWP2Q15269 919 aaKnown RBP16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 LLGL2Q6P1M3 1020 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 TMEM184AQ6ZMB5 413 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 SERINC5Q86VE9 423 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 KATNAL1Q9BW62 490 aa16.97■□□□□ 0.31
SYNCRIP-203ENST00000444272 PRKAB2O43741 272 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 BMP3P12645 472 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 STAT2P52630 851 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 KCNC3Q14003 757 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 ZDHHC14Q8IZN3 488 aa16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
SYNCRIP-203ENST00000444272 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms