RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 METAP2P50579 478 aaKnown RBP eCLIP21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 EVCP57679 992 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 SP2Q02086 613 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 NEDD9Q14511 834 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 BRF1Q92994 677 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 RNPC3Q96LT9 517 aaKnown RBP21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 SPATA33Q96N06 139 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 SENP7Q9BQF6 1050 aa21.64■■□□□ 1.05
ATPAF2-201ENST00000444058 SPDYE3A6NKU9 549 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 F2P00734 622 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 SMAD3P84022 425 aaKnown RBP21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 APOBRQ0VD83 1088 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 FAM47CQ5HY64 1035 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 PSRC1Q6PGN9 363 aaPredicted RBP21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 C16orf59Q7L2K0 433 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 NLRX1Q86UT6 975 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 GPKOWQ92917 476 aaPredicted RBP eCLIP21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 TM6SF1Q9BZW5 370 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 GLT8D2Q9H1C3 349 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 MLXIPQ9HAP2 919 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 ZSWIM6Q9HCJ5 1215 aa21.63■■□□□ 1.05
ATPAF2-201ENST00000444058 HSDL1Q3SXM5 330 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 METTL7BQ6UX53 244 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 RUFY3Q7L099 469 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 ZFP91Q96JP5 570 aaPredicted RBP21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 CDHR1Q96JP9 859 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 IL23AQ9NPF7 189 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 BARHL2Q9NY43 387 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 RTEL1Q9NZ71 1219 aa21.62■■□□□ 1.05
ATPAF2-201ENST00000444058 HAS3O00219 553 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 PITPNM1O00562 1244 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 NAPAP54920 295 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 TMEM240Q5SV17 173 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 RASIP1Q5U651 963 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 DEFB123Q8N688 67 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 GIMAP8Q8ND71 665 aaPredicted RBP21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 GPRASP2Q96D09 838 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 WNT8AQ9H1J5 351 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 EHMT1Q9H9B1 1298 aa21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 NAP1L2Q9ULW6 460 aaPredicted RBP21.61■■□□□ 1.05
ATPAF2-201ENST00000444058 UMODL1Q5DID0 1318 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 MAFGO15525 162 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 FOSP01100 380 aaPredicted RBP21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 CYP2C9P11712 490 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 SEMA3FQ13275 785 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 PFKFB3Q16875 520 aaPredicted RBP21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 TYW1BQ6NUM6 668 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 RPUSD2Q8IZ73 545 aaKnown RBP21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 C7orf31Q8N865 590 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 GTF2IRD1Q9UHL9 959 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 PCDHA6Q9UN73 950 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 PCDHA8Q9Y5H6 950 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 CYP46A1Q9Y6A2 500 aa21.6■■□□□ 1.05
ATPAF2-201ENST00000444058 STXBP3O00186 592 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 PFKMP08237 780 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 PSEN2P49810 448 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 BFSP2Q13515 415 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 MFSD10Q14728 455 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 PTGISQ16647 500 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 UBE2SQ16763 222 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 KIAA0753Q2KHM9 967 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 ZNF365Q70YC5 407 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 C16orf70Q9BSU1 422 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 NOD1Q9Y239 953 aa21.59■■□□□ 1.05
ATPAF2-201ENST00000444058 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 NOP56O00567 594 aaKnown RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 PRPF3O43395 683 aaKnown RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 EIF5BO60841 1220 aaKnown RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 SCG2P13521 617 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 ITGB5P18084 799 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 RFC2P35250 354 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 ADCY7P51828 1080 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 CCL23P55773 120 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 AP3B2Q13367 1082 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 CAGE1Q8TC20 777 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 HERVK_113Q902F9 699 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 MTIF3Q9H2K0 278 aaKnown RBP21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 UBIAD1Q9Y5Z9 338 aa21.58■■□□□ 1.05
ATPAF2-201ENST00000444058 ESYT2A0FGR8 921 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 SMCO2A6NFE2 343 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 FGBP02675 491 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 ZNF286BP0CG31 522 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 ACRP10323 421 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 PDIA3P30101 505 aaKnown RBP21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 CHMP4BP1P59074 171 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 RBL2Q08999 1139 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 GDF6Q6KF10 455 aaPredicted RBP21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 CYFIP1Q7L576 1253 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 CCDC155Q8N6L0 562 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 RETREG2Q8NC44 543 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 CCDC12Q8WUD4 166 aaPredicted RBP21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 CTAGE1Q96RT6 745 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 MTMR10Q9NXD2 777 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 HDAC6Q9UBN7 1215 aa21.57■■□□□ 1.04
ATPAF2-201ENST00000444058 TMEM265A0A087WTH1 108 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms