RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 LCORLQ8N3X6 602 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 CERS5Q8N5B7 392 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 ZNF384Q8TF68 577 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 SEC62Q99442 399 aaKnown RBP8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 IL25Q9H293 177 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 AATFQ9NY61 560 aaKnown RBP eCLIP8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 ANAPC4Q9UJX5 808 aa8.39□□□□□ -1.07
R3HDM1-210ENST00000443537 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 H3BRJ5 948 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 SLC27A2O14975 620 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 FGAP02671 866 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ZNF280AP59817 542 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 GPR162Q16538 588 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 CCDC129Q6ZRS4 1044 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ADGRA1Q86SQ6 560 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 DMRTC2Q8IXT2 367 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 FBXL16Q8N461 479 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 MIGA1Q8NAN2 632 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 SNX21Q969T3 373 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 IDI2Q9BXS1 227 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 KRT23Q9C075 422 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ARMT1Q9H993 441 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 DCP1AQ9NPI6 582 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 CYP46A1Q9Y6A2 500 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
R3HDM1-210ENST00000443537 H7C1D1 291 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 ENTPD3O75355 529 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 RAD17O75943 681 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 CYP21A2P08686 494 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 DGKGP49619 791 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 ARL4DP49703 201 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 RASSF7Q02833 373 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 PPP2R3AQ06190 1150 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 PDE4BQ07343 736 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 SART3Q15020 963 aaKnown RBP8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 DLGAP5Q15398 846 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 CCDC178Q5BJE1 867 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 VPS53Q5VIR6 699 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 BLOC1S2Q6QNY1 142 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 RALYLQ86SE5 291 aaKnown RBP8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 TTC6Q86TZ1 520 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 TEX11Q8IYF3 940 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 NCOA7Q8NI08 942 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 RNF34Q969K3 372 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 ALDH8A1Q9H2A2 487 aaPredicted RBP8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 JAG2Q9Y219 1238 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 SNX14Q9Y5W7 946 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 WDR90Q96KV7 1748 aa8.37□□□□□ -1.07
R3HDM1-210ENST00000443537 ATRNL1Q5VV63 1379 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 FLT1P17948 1338 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 FOXP2O15409 715 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 FGRP09769 529 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 MCM5P33992 734 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 TNNI2P48788 182 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 RBM5P52756 815 aaKnown RBP eCLIP8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 RHBDL3P58872 404 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 PPARAQ07869 468 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 AKNAD1Q5T1N1 836 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 LDLRAD1Q5T700 205 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 C9orf131Q5VYM1 1079 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 APOBEC3HQ6NTF7 200 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 MFSD6Q6ZSS7 791 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 RUFY3Q7L099 469 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 FAM83AQ86UY5 434 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 HSCBQ8IWL3 235 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 EPB41L4AQ9HCS5 686 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 TMEM39AQ9NV64 488 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 RNF181Q9P0P0 153 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 SWAP70Q9UH65 585 aa8.36□□□□□ -1.07
R3HDM1-210ENST00000443537 PITPNM2Q9BZ72 1349 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 IQCA1LA6NCM1 817 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 PIK3R2O00459 728 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ORC4O43929 436 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 CHGBP05060 677 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 NID1P14543 1247 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 CASTP20810 708 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 INSM1Q01101 510 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 MAP3K11Q16584 847 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms