RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
NLE1-202ENST00000442241 MLXIPQ9HAP2 919 aa17.86■□□□□ 0.45
NLE1-202ENST00000442241 NLRC4Q9NPP4 1024 aa17.86■□□□□ 0.45
NLE1-202ENST00000442241 POTEFA5A3E0 1075 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 POTEIP0CG38 1075 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
NLE1-202ENST00000442241 ZBED6P86452 979 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 POTEEQ6S8J3 1075 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 FAM114A1Q8IWE2 563 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 SWAP70Q9UH65 585 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 FAM170AA1A519 330 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
NLE1-202ENST00000442241 PRR16Q569H4 304 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 EXOC4Q96A65 974 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 DNAJC19Q96DA6 116 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 RAB34Q9BZG1 259 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 ARHGAP20Q9P2F6 1191 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.85■□□□□ 0.45
NLE1-202ENST00000442241 STK17AQ9UEE5 414 aa17.85■□□□□ 0.45
NLE1-202ENST00000442241 LRRC53A6NM62 1247 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 TRAF5O00463 557 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 PSMC6P62333 389 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 MEA1Q16626 185 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 TMEM119Q4V9L6 283 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 H3BQF6 201 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 MED24O75448 989 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 APBA3O96018 575 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 EIF4A3P38919 411 aaKnown RBP17.84■□□□□ 0.45
NLE1-202ENST00000442241 TMC4Q7Z404 712 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 CYP2W1Q8TAV3 490 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 GOLGA5Q8TBA6 731 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 CCDC42Q96M95 316 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 RASSF4Q9H2L5 321 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 SMARCAL1Q9NZC9 954 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 SIK3Q9Y2K2 1263 aa17.84■□□□□ 0.45
NLE1-202ENST00000442241 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 ARID5AQ03989 594 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 PDIA5Q14554 519 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 RRP1BQ14684 758 aaKnown RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 AOC3Q16853 763 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 LRRC55Q6ZSA7 311 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 GSPT2Q8IYD1 628 aaKnown RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 ANO3Q9BYT9 981 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 TMX4Q9H1E5 349 aaPredicted RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 HAUS4Q9H6D7 363 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 BRWD3Q6RI45 1802 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 MYO1CO00159 1063 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 ECE2O60344 883 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 MOCS3O95396 460 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 CYLC1P35663 651 aaPredicted RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 CYP4A11Q02928 519 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 GPATCH4Q5T3I0 446 aaKnown RBP17.83■□□□□ 0.44
NLE1-202ENST00000442241 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 GPBP1Q86WP2 473 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 JADE2Q9NQC1 790 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 ADAM21Q9UKJ8 722 aa17.83■□□□□ 0.44
NLE1-202ENST00000442241 CXCR5P32302 372 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 DNA2P51530 1060 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 ICA1Q05084 483 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 CCDC40Q4G0X9 1142 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 HERC4Q5GLZ8 1057 aaPredicted RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 TRAPPC11Q7Z392 1133 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 ERGIC2Q96RQ1 377 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 EHD2Q9NZN4 543 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 CAPN6Q9Y6Q1 641 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 hCG_1984214I3L0E3 225 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 PDE2AO00408 941 aaPredicted RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 MAP2K7O14733 419 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 IPO7O95373 1038 aaKnown RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 KRT18P05783 430 aaKnown RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 GUF1Q8N442 669 aaKnown RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 ZNF713Q8N859 430 aaPredicted RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 NUP58Q9BVL2 599 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 PDE11AQ9HCR9 933 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 LCMT1Q9UIC8 334 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 SCAF8Q9UPN6 1271 aaKnown RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
NLE1-202ENST00000442241 ARFGEF1Q9Y6D6 1849 aa17.82■□□□□ 0.44
NLE1-202ENST00000442241 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 CCDC151A5D8V7 595 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 F5H6K3 240 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 MEIS2O14770 477 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 CASP5P51878 434 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 UBXN2AP68543 259 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 KRT83P78385 493 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 GFPT1Q06210 699 aaPredicted RBP17.81■□□□□ 0.44
NLE1-202ENST00000442241 KLRC3Q07444 240 aa17.81■□□□□ 0.44
NLE1-202ENST00000442241 PABPC4Q13310 644 aaKnown RBP eCLIP17.81■□□□□ 0.448e-9■■■■□ 20.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms