RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EP300Q09472 2414 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-206ENST00000441089 MAP1BP46821 2468 aaKnown RBP5.89□□□□□ -1.47
PTPN4-206ENST00000441089 DNM1LO00429 736 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 IGHDP01880 384 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 ALADP13716 330 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 ZKSCAN1P17029 563 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 KLRK1P26718 216 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CTSWP56202 376 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 HDLBPQ00341 1268 aaKnown RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CACNB2Q08289 660 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 NFIAQ12857 509 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 PCSK7Q16549 785 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 SWI5Q1ZZU3 235 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CWF19L2Q2TBE0 894 aaKnown RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CCDC174Q6PII3 467 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 TXNDC11Q6PKC3 985 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CCDC129Q6ZRS4 1044 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 MYO19Q96H55 970 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 USP44Q9H0E7 712 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 C1orf115Q9H7X2 142 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 PDLIM7Q9NR12 457 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 TLR7Q9NYK1 1049 aaKnown RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 ZNF112Q9UJU3 913 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 NOVA2Q9UNW9 492 aaKnown RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 FLNBO75369 2602 aaKnown RBP5.88□□□□□ -1.47
PTPN4-206ENST00000441089 PHIPQ8WWQ0 1821 aa5.88□□□□□ -1.47
PTPN4-206ENST00000441089 CEP250Q9BV73 2442 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MMP20O60882 483 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MICAL2O94851 1124 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 DDX58O95786 925 aaKnown RBP5.87□□□□□ -1.47
PTPN4-206ENST00000441089 CYP2B6P20813 491 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 RFX1P22670 979 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 ITGB8P26012 769 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 CRKP46108 304 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 FPGSQ05932 587 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN4-206ENST00000441089 ELOAQ14241 798 aaKnown RBP5.87□□□□□ -1.47
PTPN4-206ENST00000441089 RAB30Q15771 203 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MFSD14BQ5SR56 506 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 SLC39A5Q6ZMH5 540 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 SIRT2Q8IXJ6 389 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 ARRDC4Q8NCT1 418 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 LINS1Q8NG48 757 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 LPAR1Q92633 364 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 VTI1AQ96AJ9 217 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MPHOSPH8Q99549 860 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MYD88Q99836 296 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 SRCIN1Q9C0H9 1055 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 CWC25Q9NXE8 425 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-206ENST00000441089 MSRAQ9UJ68 235 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 AGTPBP1Q9UPW5 1226 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 TACC3Q9Y6A5 838 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 A0A1B0GUL6 1792 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 DOCK1Q14185 1865 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 SMCHD1A6NHR9 2005 aa5.87□□□□□ -1.47
PTPN4-206ENST00000441089 GPR179Q6PRD1 2367 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 DOCK2Q92608 1830 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 UTYO14607 1347 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 KBTBD13C9JR72 458 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 ALDH1L1O75891 902 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 NBPF7P0C2Y1 421 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-206ENST00000441089 RAG1P15918 1043 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 EPB42P16452 691 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 CCND3P30281 292 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-206ENST00000441089 ARSDP51689 593 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 CASP7P55210 303 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 GCKRQ14397 625 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 SNX17Q15036 470 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 NFXL1Q6ZNB6 911 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 MIGA2Q7L4E1 593 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 JARID2Q92833 1246 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-206ENST00000441089 TEKT1Q969V4 418 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 KAZALD1Q96I82 304 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 CCDC136Q96JN2 1154 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 PBX4Q9BYU1 374 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 GREM2Q9H772 168 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 SLC28A3Q9HAS3 691 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 ZHX2Q9Y6X8 837 aa5.86□□□□□ -1.47
PTPN4-206ENST00000441089 LOC285556D6RIA3 1793 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 TRIM43BA6NCK2 446 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 RGS2P41220 211 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 CACNB3P54284 484 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 EPHB4P54760 987 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 CHRNDQ07001 517 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 AAMPQ13685 434 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 TRIM60Q495X7 471 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 EPHA10Q5JZY3 1008 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 MFSD14CQ5VZR4 134 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 OGFOD2Q6N063 350 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 CEP85Q6P2H3 762 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 SKAP1Q86WV1 359 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 CCAR1Q8IX12 1150 aaKnown RBP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 ABI1Q8IZP0 508 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 TDRD7Q8NHU6 1098 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms