RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 SIK3Q9Y2K2 1263 aa9.13□□□□□ -0.95
SPIRE1-204ENST00000440472 B4DLN1 442 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 ZRANB2O95218 330 aaKnown RBP eCLIP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 RPA1P27694 616 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 ARHGAP4P98171 946 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 FKBP3Q00688 224 aaKnown RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 COASYQ13057 564 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 BMS1Q14692 1282 aaKnown RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 KCNK18Q7Z418 384 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 CREBRFQ8IUR6 639 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 PURBQ96QR8 312 aaKnown RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 NAPGQ99747 312 aaPredicted RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 POLR3CQ9BUI4 534 aaPredicted RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 REXO2Q9Y3B8 237 aaKnown RBP9.12□□□□□ -0.95
SPIRE1-204ENST00000440472 SPDYE2BA6NHP3 402 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 COBLO75128 1261 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 PLA2G4BP0C869 781 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SPDYE6P0CI01 402 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 AMPD2Q01433 879 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ECM1Q16610 540 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 KIF4BQ2VIQ3 1234 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 FAM26FQ5R3K3 315 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 LENG9Q96B70 501 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 CAMKK2Q96RR4 588 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 TSGA10Q9BZW7 698 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SLC39A2Q9NP94 309 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 TMOD2Q9NZR1 351 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 FAM184BQ9ULE4 1060 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ANO9A1A5B4 782 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 YDJCA8MPS7 323 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 MARCH6O60337 910 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 CYP11B2P19099 503 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 RBM5P52756 815 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SLC12A3P55017 1021 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 GABPB1Q06547 395 aaPredicted RBP9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 BRD3Q15059 726 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 AOC3Q16853 763 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 BMT2Q1RMZ1 405 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ZNF569Q5MCW4 686 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 TXLNBQ8N3L3 684 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 SYT2Q8N9I0 419 aaPredicted RBP9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 ACRBPQ8NEB7 543 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 PRMT6Q96LA8 375 aaPredicted RBP9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 CHP1Q99653 195 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 PANK4Q9NVE7 773 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 RABGAP1Q9Y3P9 1069 aa9.11□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 TRIM21P19474 475 aaKnown RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 CLCN6P51797 869 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 GHRHRQ02643 423 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 TCP10Q12799 353 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 NFIL3Q16649 462 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 PAPD7Q5XG87 772 aaKnown RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 FAM160B2Q86V87 743 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 KRT222Q8N1A0 295 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 MSANTD4Q8NCY6 345 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 LRRN4CLQ8ND94 238 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 AGBL3Q8NEM8 1001 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 CHURC1Q8WUH1 139 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 ZBED3Q96IU2 234 aaPredicted RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 RPGRIP1Q96KN7 1286 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 SH2D4AQ9H788 454 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 TDRD3Q9H7E2 651 aaKnown RBP9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 LZTFL1Q9NQ48 299 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 RAB21Q9UL25 225 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 PCDHAC2Q9Y5I4 1007 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 COL4A3BPQ9Y5P4 624 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 SSU72P8A0A1W2PR75 194 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 SPDYE3A6NKU9 549 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 KRT86O43790 486 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 GH2P01242 217 aa9.1□□□□□ -0.95
SPIRE1-204ENST00000440472 HERVK_113P62684 666 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms