RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CAP2P40123 477 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 FKBP1CQ5VVH2 108 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 ADSSL1Q8N142 457 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 NLGN2Q8NFZ4 835 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 PSD3Q9NYI0 1048 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 STK17AQ9UEE5 414 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 KCNJ18B7U540 433 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 NFKBIEO00221 500 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 EGFRP00533 1210 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 FCER1AP12319 257 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 USP11P51784 963 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 KCNJ12Q14500 433 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 KRT31Q15323 416 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 SRLQ86TD4 932 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 ZBTB9Q96C00 473 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 GLIS2Q9BZE0 524 aaPredicted RBP15.75■□□□□ 0.11
LIMD1-202ENST00000440097 SH2D4AQ9H788 454 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 MYH7BA7E2Y1 1941 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 GOLGA6L9A6NEM1 432 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 SPAG1Q07617 926 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
LIMD1-202ENST00000440097 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
LIMD1-202ENST00000440097 ADD3Q9UEY8 706 aaKnown RBP15.75■□□□□ 0.11
LIMD1-202ENST00000440097 RRP15Q9Y3B9 282 aaKnown RBP15.75■□□□□ 0.11
LIMD1-202ENST00000440097 PSME4Q14997 1843 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 ASNSP08243 561 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
LIMD1-202ENST00000440097 RASSF7Q02833 373 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 STK4Q13043 487 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 TBC1D10BQ4KMP7 808 aaPredicted RBP15.74■□□□□ 0.11
LIMD1-202ENST00000440097 SAMD7Q7Z3H4 446 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 MTMR14Q8NCE2 650 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 CHURC1Q8WUH1 139 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 C7orf25Q9BPX7 421 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
LIMD1-202ENST00000440097 H7C1D1 291 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 ACTN2P35609 894 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 TCP11X2Q5H9J9 407 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 DESI2Q9BSY9 194 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 ZNF341Q9BYN7 854 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
LIMD1-202ENST00000440097 CCDC151A5D8V7 595 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 MYMKA6NI61 221 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 MAP2K7O14733 419 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 STAT3P40763 770 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 TBX2Q13207 712 aaPredicted RBP15.73■□□□□ 0.11
LIMD1-202ENST00000440097 TNFAIP1Q13829 316 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 KCNK18Q7Z418 384 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 CSGALNACT2Q8N6G5 542 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 RAD54LQ92698 747 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
LIMD1-202ENST00000440097 EFCC1Q9HA90 598 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 FBXO28Q9NVF7 368 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 KIAA1024Q9UPX6 916 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 FOSP01100 380 aaPredicted RBP15.73■□□□□ 0.11
LIMD1-202ENST00000440097 PDE11AQ9HCR9 933 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 VPS18Q9P253 973 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 SYNPO2Q9UMS6 1093 aa15.73■□□□□ 0.11
LIMD1-202ENST00000440097 TBC1D12O60347 775 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 STX10O60499 249 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 BRD3Q15059 726 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 NCAPH2Q6IBW4 605 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 SLFN12Q8IYM2 578 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 DDX12PQ92771 950 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 NOP2P46087 812 aaKnown RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 GMPSP49915 693 aaPredicted RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 UBXN2AP68543 259 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 UBXN1Q04323 297 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 TRAF1Q13077 416 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 ECM1Q16610 540 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 MCTP2Q6DN12 878 aa15.72■□□□□ 0.11
LIMD1-202ENST00000440097 IRX2Q9BZI1 471 aaPredicted RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 BMP2KQ9NSY1 1161 aaPredicted RBP15.72■□□□□ 0.11
LIMD1-202ENST00000440097 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 POTECB2RU33 542 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 RBL2Q08999 1139 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 CCDC125Q86Z20 511 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 DHTKD1Q96HY7 919 aaPredicted RBP15.71■□□□□ 0.11
LIMD1-202ENST00000440097 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 KDM3AQ9Y4C1 1321 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 BICDL2A1A5D9 508 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 FAM86B1E9PN63 330 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 FAM86B2P0C5J1 330 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 LEKR1Q6ZMV7 388 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 P2RX5Q93086 422 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
LIMD1-202ENST00000440097 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms