RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 PRDM12Q9H4Q4 367 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 SLC28A3Q9HAS3 691 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 YBX2Q9Y2T7 364 aaKnown RBP18.55■□□□□ 0.56
ITGB1-207ENST00000439974 TRIP12Q14669 1992 aaPredicted RBP18.54■□□□□ 0.56
ITGB1-207ENST00000439974 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 IQCF3P0C7M6 154 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 ACTN1P12814 892 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 LAMC2Q13753 1193 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 PTGISQ16647 500 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 TMTC2Q8N394 836 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 CCDC155Q8N6L0 562 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
ITGB1-207ENST00000439974 KAT2BQ92831 832 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 BRF1Q92994 677 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 MYH7BA7E2Y1 1941 aa18.54■□□□□ 0.56
ITGB1-207ENST00000439974 hCG_1642624A0A1W2PR95 340 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 GCOM1H8Y6P7 765 aaPredicted RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 POLR2MP0CAP2 368 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 ATP2A2P16615 1042 aaKnown RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 RABGGTBP53611 331 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 DHX37Q8IY37 1157 aaKnown RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 SRBD1Q8N5C6 995 aaKnown RBP18.53■□□□□ 0.56
ITGB1-207ENST00000439974 USP38Q8NB14 1042 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 CAGE1Q8TC20 777 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 KATNAL1Q9BW62 490 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 PCDHA11Q9Y5I1 949 aa18.53■□□□□ 0.56
ITGB1-207ENST00000439974 TET1Q8NFU7 2136 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 RGS20O76081 388 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 PSMA5P28066 241 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 PGM5Q15124 567 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 GDF6Q6KF10 455 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-207ENST00000439974 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 AFAP1L1Q8TED9 768 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.56
ITGB1-207ENST00000439974 CHD9Q3L8U1 2897 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 EPB41L2O43491 1005 aaKnown RBP18.51■□□□□ 0.55
ITGB1-207ENST00000439974 F2P00734 622 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 CCND2P30279 289 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 KIF5BP33176 963 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 PSEN2P49810 448 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 PPP2R2DQ66LE6 453 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 SYNE3Q6ZMZ3 975 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 RUFY3Q7L099 469 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 C7orf31Q8N865 590 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 SLC9A7Q96T83 725 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 FTOQ9C0B1 505 aaKnown RBP eCLIP18.51■□□□□ 0.55
ITGB1-207ENST00000439974 ZSWIM6Q9HCJ5 1215 aa18.51■□□□□ 0.55
ITGB1-207ENST00000439974 GOLGA8AA7E2F4 631 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 GOLGA8BA8MQT2 603 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 ZBTB43O43298 467 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-207ENST00000439974 ADGRE1Q14246 886 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 FCHSD1Q86WN1 690 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 IL31RAQ8NI17 732 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 MAP3K14Q99558 947 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 HDAC6Q9UBN7 1215 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
ITGB1-207ENST00000439974 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 HAS3O00219 553 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 GGPS1O95749 300 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 ZNF286BP0CG31 522 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 CALM1P0DP23 149 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 CALM2P0DP24 149 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 CALM3P0DP25 149 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 TGFB3P10600 412 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 MYOGP15173 224 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 SELPP16109 830 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 CDC27P30260 824 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 RBL2Q08999 1139 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 TOB2Q14106 344 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-207ENST00000439974 MFSD10Q14728 455 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 RTN1Q16799 776 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
ITGB1-207ENST00000439974 MYSM1Q5VVJ2 828 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 TMTC3Q6ZXV5 915 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 LRRC8DQ7L1W4 858 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 PHOSPHO2Q8TCD6 241 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 DHX38Q92620 1227 aaKnown RBP18.49■□□□□ 0.55
ITGB1-207ENST00000439974 SPATA33Q96N06 139 aa18.49■□□□□ 0.55
ITGB1-207ENST00000439974 PPFIA4O75335 1185 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 BAIAP3O94812 1187 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 PARNO95453 639 aaKnown RBP18.48■□□□□ 0.55
ITGB1-207ENST00000439974 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
ITGB1-207ENST00000439974 IGFBP4P22692 258 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 HSDL1Q3SXM5 330 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 PPM1EQ8WY54 764 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms