RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 GBF1Q92538 1859 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 NR3C2P08235 984 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 CDC27P30260 824 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 KIF5BP33176 963 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 CDK7P50613 346 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 CXCL17Q6UXB2 119 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 MCF2L2Q86YR7 1114 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 TMTC2Q8N394 836 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 NSUN6Q8TEA1 469 aaKnown RBP9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 JAKMIP1Q96N16 626 aaKnown RBP9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 PDCD2LQ9BRP1 358 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 MAF1Q9H063 256 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 STARD7Q9NQZ5 370 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 SLC12A7Q9Y666 1083 aa9.88□□□□□ -0.83
HERPUD2-206ENST00000438224 ELP1O95163 1332 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 FRMPD4Q14CM0 1322 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 KAT6AQ92794 2004 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 MEIS2O14770 477 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 PQBP1O60828 265 aaKnown RBP9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SMARCA1P28370 1054 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 BMP8BP34820 402 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 PSMC6P62333 389 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 APOBRQ0VD83 1088 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 FAAP100Q0VG06 881 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 KRT32Q14532 448 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 PGM5Q15124 567 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SEPT14Q6ZU15 432 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 ANKRD33Q7Z3H0 272 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SLC43A3Q8NBI5 491 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 PCSK9Q8NBP7 692 aaKnown RBP9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SCFD2Q8WU76 684 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 GPKOWQ92917 476 aaPredicted RBP eCLIP9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 RRP36Q96EU6 259 aaKnown RBP9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 USP26Q9BXU7 913 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 AGXT2Q9BYV1 514 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 OCEL1Q9H607 264 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SPC25Q9HBM1 224 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 SCUBE2Q9NQ36 999 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 PRDM5Q9NQX1 630 aaPredicted RBP9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 Q9Y3F1 56 aa9.87□□□□□ -0.83
HERPUD2-206ENST00000438224 A0A0U1RQG5 324 aaPredicted RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 GCOM1H8Y6P7 765 aaPredicted RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 ARVCFO00192 962 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 REC8O95072 547 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 CLTBP09497 229 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 POLR2MP0CAP2 368 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 CALM1P0DP23 149 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 CALM2P0DP24 149 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 CALM3P0DP25 149 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 TXNP10599 105 aaKnown RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 RPS6KB1P23443 525 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 EPHB4P54760 987 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 MRPS9P82933 396 aaKnown RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 ARHGAP1Q07960 439 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 PPP2R5BQ15173 497 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 LY6KQ17RY6 165 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 ARHGEF16Q5VV41 709 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 USP17L6PQ6QN14 398 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 Q6ZUG5 572 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 FAM126BQ8IXS8 530 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 OR6J1Q8NGC5 347 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 BADQ92934 168 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 BRF1Q92994 677 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 IWS1Q96ST2 819 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 LZTS2Q9BRK4 669 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 BCAS3Q9H6U6 928 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 TBX21Q9UL17 535 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 ADGRG1Q9Y653 693 aa9.86□□□□□ -0.83
HERPUD2-206ENST00000438224 GOLGA8AA7E2F4 631 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 GOLGA8BA8MQT2 603 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 KIAA0355O15063 1070 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 ADAMTS3O15072 1205 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 ZBTB43O43298 467 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 CD4P01730 458 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 MYCLP12524 364 aaPredicted RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 CASTP20810 708 aaKnown RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 GNAQP50148 359 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 PURAQ00577 322 aaKnown RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 SP2Q02086 613 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 TOB2Q14106 344 aaPredicted RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 TTLL4Q14679 1199 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 STXBP2Q15833 593 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 UBE2SQ16763 222 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 RTN1Q16799 776 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 C9orf50Q5SZB4 431 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 WWC2Q6AWC2 1192 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms