RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 POTEBQ6S5H4 581 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 FAM71BQ8TC56 605 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 RPGRIP1Q96KN7 1286 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 RABEP2Q9H5N1 569 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 LUC7LQ9NQ29 371 aaKnown RBP18.52■□□□□ 0.56
TTC3-209ENST00000438055 RSPH14Q9UHP6 348 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 PLAGL2Q9UPG8 496 aa18.52■□□□□ 0.56
TTC3-209ENST00000438055 LRRC63Q05C16 580 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 PAPD7Q5XG87 772 aaKnown RBP18.51■□□□□ 0.55
TTC3-209ENST00000438055 TTYH3Q9C0H2 523 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 MEIS1O00470 390 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 ZNF76P36508 570 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 STAT3P40763 770 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 DDX4Q9NQI0 724 aaKnown RBP18.51■□□□□ 0.55
TTC3-209ENST00000438055 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 ZNF263O14978 683 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 APBA1Q02410 837 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 SFMBT2Q5VUG0 894 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 NOX5Q96PH1 765 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 MTMR9Q96QG7 549 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 SPAG5Q96R06 1193 aa18.51■□□□□ 0.55
TTC3-209ENST00000438055 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
TTC3-209ENST00000438055 PRR16Q569H4 304 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 COL16A1Q07092 1604 aaPredicted RBP18.5■□□□□ 0.55
TTC3-209ENST00000438055 FXR2P51116 673 aaKnown RBP eCLIP18.5■□□□□ 0.558e-8■■■■□ 20.7
TTC3-209ENST00000438055 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 ESYT2A0FGR8 921 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 ANO9A1A5B4 782 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 ACTN2P35609 894 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 IFT81Q8WYA0 676 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 HYOU1Q9Y4L1 999 aa18.5■□□□□ 0.55
TTC3-209ENST00000438055 PLA2G4BP0C869 781 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
TTC3-209ENST00000438055 SEMA3FQ13275 785 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 DCAF17Q5H9S7 520 aaPredicted RBP18.49■□□□□ 0.55
TTC3-209ENST00000438055 C10orf67Q8IYJ2 551 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 SELENOOQ9BVL4 669 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 SNX12Q9UMY4 172 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 GOLGA6BA6NDN3 693 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
TTC3-209ENST00000438055 FTCDO95954 541 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 IL1R1P14778 569 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 CYP4A11Q02928 519 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.55
TTC3-209ENST00000438055 ADAM9Q13443 819 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 LRRC1Q9BTT6 524 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 MED4Q9NPJ6 270 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 hCG_1984214I3L0E3 225 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 ECM1Q16610 540 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 C8orf74Q6P047 294 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 WDR93Q6P2C0 686 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 ZNF713Q8N859 430 aaPredicted RBP18.49■□□□□ 0.55
TTC3-209ENST00000438055 TBC1D5Q92609 795 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 SH2D4AQ9H788 454 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 LRRC4BQ9NT99 713 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 SNED1Q8TER0 1413 aa18.49■□□□□ 0.55
TTC3-209ENST00000438055 A0A1B0GUL6 1792 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 ZBTB5O15062 677 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 KLHL30Q0D2K2 578 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 PDIA5Q14554 519 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
TTC3-209ENST00000438055 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.551e-6■■□□□ 12.5
TTC3-209ENST00000438055 OSBPL9Q96SU4 736 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 NT5C3AQ9H0P0 336 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 MYBL2P10244 700 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 GYS1P13807 737 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 GGCXP38435 758 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 FAM133AQ8N9E0 248 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 GOLGA5Q8TBA6 731 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 DBNDD1Q9H9R9 158 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 ADAMTS1Q9UHI8 967 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 SIK3Q9Y2K2 1263 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 IRS2Q9Y4H2 1338 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 A0A1W2PQJ5 194 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 POTEFA5A3E0 1075 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 RGL2O15211 777 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 POTEIP0CG38 1075 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 NFIAQ12857 509 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
TTC3-209ENST00000438055 POTEGQ6S5H5 508 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 POTEEQ6S8J3 1075 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 HDAC7Q8WUI4 952 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
TTC3-209ENST00000438055 CETN3O15182 167 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 TCP1P17987 556 aaKnown RBP18.47■□□□□ 0.55
TTC3-209ENST00000438055 IQCDQ96DY2 449 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 EMILIN3Q9NT22 766 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 KIAA0753Q2KHM9 967 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 QRICH1Q2TAL8 776 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 SPATA4Q8NEY3 305 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 MS4A14Q96JA4 679 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 DMGDHQ9UI17 866 aaKnown RBP18.47■□□□□ 0.55
TTC3-209ENST00000438055 SMARCA1P28370 1054 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms