RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 IQCF3P0C7M6 154 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 RXRAP19793 462 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 UBA1P22314 1058 aaKnown RBP20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 ICAM3P32942 547 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 MFSD10Q14728 455 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 SKAP1Q86WV1 359 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 MICU3Q86XE3 530 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 AFAP1L1Q8TED9 768 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 INPP4AQ96PE3 977 aaPredicted RBP20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 PBX4Q9BYU1 374 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 GTF2IRD1Q9UHL9 959 aa20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 ZBBXA8MT70 800 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 NOP56O00567 594 aaKnown RBP20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 MEIS2O14770 477 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 FIBPO43427 364 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 SP2Q02086 613 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 PCNX4Q63HM2 1172 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 GDF6Q6KF10 455 aaPredicted RBP20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 NLRX1Q86UT6 975 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 ALG1Q9BT22 464 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 CXXC1Q9P0U4 656 aaPredicted RBP20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 HDAC6Q9UBN7 1215 aa20.19■□□□□ 0.82
SBDSP1-203ENST00000437201 SPATA31C2B4DYI2 1134 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 HAS3O00219 553 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 ZNF286BP0CG31 522 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 FOSL2P15408 326 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 MRPS9P82933 396 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 EXOSC10Q01780 885 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 HSDL1Q3SXM5 330 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 APOA5Q6Q788 366 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 GIMAP8Q8ND71 665 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 PPP1R13LQ8WUF5 828 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 MYLIPQ8WY64 445 aa20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 FTOQ9C0B1 505 aaKnown RBP eCLIP20.18■□□□□ 0.82
SBDSP1-203ENST00000437201 GRXCR1A8MXD5 290 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 ZBTB43O43298 467 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 FGD1P98174 961 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 METTL7BQ6UX53 244 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 MAFAQ8NHW3 353 aaPredicted RBP20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 CDHR1Q96JP9 859 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 SENP7Q9BQF6 1050 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 USP26Q9BXU7 913 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 EHMT1Q9H9B1 1298 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
SBDSP1-203ENST00000437201 SPDYE3A6NKU9 549 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 SORBS3O60504 671 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 NEFLP07196 543 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 SELPP16109 830 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 ATP2A2P16615 1042 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 PBX2P40425 430 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 RCAN1P53805 252 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 PTK7Q13308 1070 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 GRIN2CQ14957 1233 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 RTN1Q16799 776 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 RAB11FIP4Q86YS3 637 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 RASEFQ8IZ41 740 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 ZFP91Q96JP5 570 aaPredicted RBP20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
SBDSP1-203ENST00000437201 H3BRB1 525 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 BAIAP3O94812 1187 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 REC8O95072 547 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 RBL2Q08999 1139 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 CYFIP1Q7L576 1253 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 GAS2L1Q99501 681 aaPredicted RBP20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 C16orf70Q9BSU1 422 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 TUT1Q9H6E5 874 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 PCDHA11Q9Y5I1 949 aa20.15■□□□□ 0.82
SBDSP1-203ENST00000437201 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 ADCK5Q3MIX3 580 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 LRRC8DQ7L1W4 858 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 GPRASP2Q96D09 838 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 VWCEQ96DN2 955 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 CTAGE1Q96RT6 745 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 GLT8D2Q9H1C3 349 aa20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 ZNF215Q9UL58 517 aaPredicted RBP20.14■□□□□ 0.81
SBDSP1-203ENST00000437201 hCG_1642624A0A1W2PR95 340 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 MAFGO15525 162 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 LGALS2P05162 132 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 GNAT1P11488 350 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 CKBP12277 381 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 PPP1R18Q6NYC8 613 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 BRPF3Q9ULD4 1205 aa20.13■□□□□ 0.81
SBDSP1-203ENST00000437201 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 KLF18A0A0U1RQI7 1052 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 C17orf102A2RUQ5 167 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 GOLGA8AA7E2F4 631 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms