RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 NEDD4P46934 1319 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 HAS3O00219 553 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 F2P00734 622 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 CFBP00751 764 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 NR3C2P08235 984 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
HDAC8-213ENST00000436675 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
HDAC8-213ENST00000436675 QRICH1Q2TAL8 776 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
HDAC8-213ENST00000436675 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 RSPH10B2B2RC85 870 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 EIF3JO75822 258 aaKnown RBP17.3■□□□□ 0.36
HDAC8-213ENST00000436675 RSPH10BP0C881 870 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 MRE11P49959 708 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 GPM6BQ13491 265 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 PTPROQ16827 1216 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 PNMA1Q8ND90 353 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 PPTC7Q8NI37 304 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 NEK9Q8TD19 979 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-213ENST00000436675 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-213ENST00000436675 PXMP2Q9NR77 195 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-213ENST00000436675 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
HDAC8-213ENST00000436675 DCXO43602 365 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 HTRA4P83105 476 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-213ENST00000436675 ESR2Q92731 530 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 YME1L1Q96TA2 773 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 OSBPL7Q9BZF2 842 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 MRPL11Q9Y3B7 192 aaKnown RBP17.29■□□□□ 0.36
HDAC8-213ENST00000436675 ATG2AQ2TAZ0 1938 aa17.29■□□□□ 0.36
HDAC8-213ENST00000436675 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 GGPS1O95749 300 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 CTSHP09668 335 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 CLUL1Q15846 466 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
HDAC8-213ENST00000436675 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-213ENST00000436675 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 ATP6V0A1Q93050 837 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 CLDND1Q9NY35 253 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 DOCK5Q9H7D0 1870 aa17.28■□□□□ 0.36
HDAC8-213ENST00000436675 CCDC171Q6TFL3 1326 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 C17orf102A2RUQ5 167 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 H3BNC9 293 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 KDM4AO75164 1064 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 NHLH1Q02575 133 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 SERINC5Q86VE9 423 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 DGKHQ86XP1 1220 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 SEPT8Q92599 483 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 GPKOWQ92917 476 aaPredicted RBP eCLIP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 FBXL18Q96ME1 805 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 RNF41Q9H4P4 317 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-213ENST00000436675 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.36
HDAC8-213ENST00000436675 ZNF318Q5VUA4 2279 aa17.27■□□□□ 0.35
HDAC8-213ENST00000436675 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
HDAC8-213ENST00000436675 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 TREHO43280 583 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 RGS20O76081 388 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 CSPG5O95196 566 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 HOXA13P31271 388 aaPredicted RBP17.26■□□□□ 0.35
HDAC8-213ENST00000436675 PDE1AP54750 535 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 SP2Q02086 613 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 ZP2Q05996 745 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 SAMD11Q96NU1 681 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 NSUN3Q9H649 340 aaKnown RBP17.26■□□□□ 0.35
HDAC8-213ENST00000436675 RALGAPA2Q2PPJ7 1873 aa17.26■□□□□ 0.35
HDAC8-213ENST00000436675 KAT6AQ92794 2004 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-213ENST00000436675 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 B4E1Z4 1266 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 OPLAHO14841 1288 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 PARP1P09874 1014 aaKnown RBP17.25■□□□□ 0.35
HDAC8-213ENST00000436675 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
HDAC8-213ENST00000436675 HOXD8P13378 290 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-213ENST00000436675 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 RPAINQ86UA6 219 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
HDAC8-213ENST00000436675 TOP1MTQ969P6 601 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms