RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ARFGAP2Q8N6H7 521 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-202ENST00000435532 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-202ENST00000435532 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
NEDD4-202ENST00000435532 SFNP31947 248 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 SLC12A2P55011 1212 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 PSMD2Q13200 908 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 MAP7D3Q8IWC1 876 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-202ENST00000435532 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 MMP14P50281 582 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 CASC4Q6P4E1 433 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 NEK9Q8TD19 979 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 DHTKD1Q96HY7 919 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-202ENST00000435532 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
NEDD4-202ENST00000435532 ZBBXA8MT70 800 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 GMNNO75496 209 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 CYP2D6P10635 497 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 RINT1Q6NUQ1 792 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 C8orf74Q6P047 294 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 ZBTB33Q86T24 672 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 KCNK9Q9NPC2 374 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 A0A1W2PQD8 194 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 CEP104O60308 925 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 EXOC3L4Q17RC7 722 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 MCPH1Q8NEM0 835 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 CETPP11597 493 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
NEDD4-202ENST00000435532 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 TOPORSQ9NS56 1045 aaPredicted RBP17.07■□□□□ 0.32
NEDD4-202ENST00000435532 TECPR2O15040 1411 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 SRGAP2CP0DJJ0 459 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 RCAN1P53805 252 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 PRPSAP1Q14558 356 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
NEDD4-202ENST00000435532 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 GRK7Q8WTQ7 553 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
NEDD4-202ENST00000435532 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 FAM186BQ8IYM0 893 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 FOXO4P98177 505 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 NFX1Q12986 1120 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 SYT10Q6XYQ8 523 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 SMIM23A6NLE4 172 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 PRELPP51888 382 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 CPS1P31327 1500 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF75DP51815 510 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 LPAR1Q92633 364 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 TLDC2A0PJX2 215 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 K7ERI5 159 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 ARHGAP6O43182 974 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 ANKS4BQ8N8V4 417 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 BZW2Q9Y6E2 419 aaKnown RBP17.06■□□□□ 0.32
NEDD4-202ENST00000435532 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
NEDD4-202ENST00000435532 NR2F2P24468 414 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 ALX1Q15699 326 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 AGBL3Q8NEM8 1001 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF70Q9UC06 446 aaPredicted RBP17.05■□□□□ 0.32
NEDD4-202ENST00000435532 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 CLIC6Q96NY7 704 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
NEDD4-202ENST00000435532 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
NEDD4-202ENST00000435532 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 FBF1Q8TES7 1133 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 C2orf40Q9H1Z8 148 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 KIF9Q9HAQ2 790 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 GGA3Q9NZ52 723 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 THAP12O43422 761 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 GRM4Q14833 912 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
NEDD4-202ENST00000435532 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms