RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 LGR4Q9BXB1 951 aa6.11□□□□□ -1.43
LINC00353-201ENST00000435401 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
LINC00353-201ENST00000435401 LRP2BPQ9P2M1 347 aa6.11□□□□□ -1.43
LINC00353-201ENST00000435401 TMEFF2Q9UIK5 374 aaPredicted RBP6.11□□□□□ -1.43
LINC00353-201ENST00000435401 ZNF652Q9Y2D9 606 aa6.11□□□□□ -1.43
LINC00353-201ENST00000435401 H7BY64 318 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 HGSO14964 777 aaPredicted RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 CYP7B1O75881 506 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 ITGAVP06756 1048 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 SNRPB2P08579 225 aaKnown RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 ATF4P18848 351 aaPredicted RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 ECI1P42126 302 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 ZXDAP98168 799 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 LSAMPQ13449 338 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 SV2CQ496J9 727 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 ACBD5Q5T8D3 534 aaPredicted RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 PLEKHH3Q7Z736 793 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 KREMEN2Q8NCW0 462 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 RCBTB1Q8NDN9 531 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 TOE1Q96GM8 510 aaKnown RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
LINC00353-201ENST00000435401 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 TANGO6Q9C0B7 1094 aa6.1□□□□□ -1.43
LINC00353-201ENST00000435401 MATN3O15232 486 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 CYP1A1P04798 512 aaPredicted RBP6.09□□□□□ -1.43
LINC00353-201ENST00000435401 ZNF28P17035 718 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 IL13P35225 146 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 ARID5AQ03989 594 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 ADAM9Q13443 819 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 GNL2Q13823 731 aaKnown RBP6.09□□□□□ -1.43
LINC00353-201ENST00000435401 C6orf15Q6UXA7 325 aaPredicted RBP6.09□□□□□ -1.43
LINC00353-201ENST00000435401 NLRP10Q86W26 655 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 MCF2L2Q86YR7 1114 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.43
LINC00353-201ENST00000435401 CLIC6Q96NY7 704 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 GMLQ99445 158 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 ACTR10Q9NZ32 417 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 DTLQ9NZJ0 730 aa6.09□□□□□ -1.43
LINC00353-201ENST00000435401 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
LINC00353-201ENST00000435401 TBX1O43435 398 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 TADA3O75528 432 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 FGRP09769 529 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 LTBRP36941 435 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 KCNJ6P48051 423 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 TNNI3KQ59H18 835 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 STEAP3Q658P3 488 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 ZNF227Q86WZ6 799 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 CHAMP1Q96JM3 812 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 DRC1Q96MC2 740 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 L2HGDHQ9H9P8 463 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 PCDHB4Q9Y5E5 795 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 PCDHA2Q9Y5H9 948 aa6.08□□□□□ -1.44
LINC00353-201ENST00000435401 TCRBV5S2A0A599 114 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 LAMTOR5O43504 91 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 SUSD5O60279 629 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 B4GALT3O60512 393 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 EMC4Q5J8M3 183 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 LARP1BQ659C4 914 aaKnown RBP6.07□□□□□ -1.44
LINC00353-201ENST00000435401 PPIL6Q8IXY8 311 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 ARRDC4Q8NCT1 418 aa6.07□□□□□ -1.44
LINC00353-201ENST00000435401 YTHDC1Q96MU7 727 aaKnown RBP6.07□□□□□ -1.44
LINC00353-201ENST00000435401 AKAP8O43823 692 aaKnown RBP6.06□□□□□ -1.44
LINC00353-201ENST00000435401 DGKIO75912 1065 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 SSBP05455 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00353-201ENST00000435401 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00353-201ENST00000435401 SF1Q15637 639 aaKnown RBP6.06□□□□□ -1.44
LINC00353-201ENST00000435401 TEPPQ6URK8 271 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 WRNIP1Q96S55 665 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 TMEM209Q96SK2 561 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00353-201ENST00000435401 CLDND1Q9NY35 253 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 PPP4R1LQ9P1A2 415 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 ST6GALNAC2Q9UJ37 374 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 FBXL7Q9UJT9 491 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
LINC00353-201ENST00000435401 NPEPPSL1A6NEC2 478 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 MAFKO60675 156 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 DDAH1O94760 285 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 LRG1P02750 347 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 ATP2B1P20020 1258 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 GFRA1P56159 465 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 FXNQ16595 210 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 PRSS53Q2L4Q9 553 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 PHOSPHO1Q8TCT1 267 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.05□□□□□ -1.44
LINC00353-201ENST00000435401 SMOC1Q9H4F8 434 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 EPB41L1Q9H4G0 881 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 HSPBP1Q9NZL4 362 aa6.05□□□□□ -1.44
LINC00353-201ENST00000435401 B2RBV5 119 aa6.04□□□□□ -1.44
LINC00353-201ENST00000435401 LCP1P13796 627 aa6.04□□□□□ -1.44
LINC00353-201ENST00000435401 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
LINC00353-201ENST00000435401 PPP2CBP62714 309 aa6.04□□□□□ -1.44
LINC00353-201ENST00000435401 PPP2CAP67775 309 aa6.04□□□□□ -1.44
LINC00353-201ENST00000435401 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms