RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 TFAP4Q01664 338 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 NCBP1Q09161 790 aaKnown RBP13.53□□□□□ -0.24
SNHG20-202ENST00000434411 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
SNHG20-202ENST00000434411 ARMC3Q5W041 872 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 XPO4Q9C0E2 1151 aaKnown RBP13.53□□□□□ -0.24
SNHG20-202ENST00000434411 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 IMPACTQ9P2X3 320 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 KCNH3Q9ULD8 1083 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 KCNH4Q9UQ05 1017 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
SNHG20-202ENST00000434411 MYH8P13535 1937 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
SNHG20-202ENST00000434411 CXCL11O14625 94 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 PLEKHA8P1O95397 391 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 CYP2D6P10635 497 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 SCG2P13521 617 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 FUT2Q10981 343 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 SHC4Q6S5L8 630 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 MAPKAPK5Q8IW41 473 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 ARL10Q8N8L6 244 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 CNNM3Q8NE01 707 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 ERO1AQ96HE7 468 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.24
SNHG20-202ENST00000434411 FAM53CQ9NYF3 392 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 VPS54Q9P1Q0 977 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 FLT1P17948 1338 aa13.52□□□□□ -0.24
SNHG20-202ENST00000434411 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 PTPRAP18433 802 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 PTPREP23469 700 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 DHX8Q14562 1220 aaKnown RBP13.52□□□□□ -0.25
SNHG20-202ENST00000434411 MCM6Q14566 821 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 SYCP1Q15431 976 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 PKN1Q16512 942 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
SNHG20-202ENST00000434411 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
SNHG20-202ENST00000434411 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
SNHG20-202ENST00000434411 CABP5Q9NP86 173 aa13.52□□□□□ -0.25
SNHG20-202ENST00000434411 TMCO5BA8MYB1 307 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 NEBLO76041 1014 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 SP3Q02447 781 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 NR5A1Q13285 461 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 CCDC70Q6NSX1 233 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 FERMT2Q96AC1 680 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 SH3GLB2Q9NR46 395 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.51□□□□□ -0.25
SNHG20-202ENST00000434411 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
SNHG20-202ENST00000434411 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 NLRP5P59047 1200 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 GRIK3Q13003 919 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 ARHGEF6Q15052 776 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
SNHG20-202ENST00000434411 HHATQ5VTY9 493 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 FASTKD5Q7L8L6 764 aaKnown RBP13.51□□□□□ -0.25
SNHG20-202ENST00000434411 SRLQ86TD4 932 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 CCDC148Q8NFR7 591 aa13.51□□□□□ -0.25
SNHG20-202ENST00000434411 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
SNHG20-202ENST00000434411 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 NMT2O60551 498 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 COPB2P35606 906 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 ABL2P42684 1182 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 TOB1P50616 345 aaPredicted RBP13.5□□□□□ -0.25
SNHG20-202ENST00000434411 NCAPHQ15003 741 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 ZNF483Q8TF39 744 aaPredicted RBP13.5□□□□□ -0.25
SNHG20-202ENST00000434411 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
SNHG20-202ENST00000434411 TACO1Q9BSH4 297 aaKnown RBP13.5□□□□□ -0.25
SNHG20-202ENST00000434411 LMCD1Q9NZU5 365 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 DACH1Q9UI36 760 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
SNHG20-202ENST00000434411 TLR2O60603 784 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 CAP2P40123 477 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 C16orf86Q6ZW13 317 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
SNHG20-202ENST00000434411 CLIC6Q96NY7 704 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
SNHG20-202ENST00000434411 FBXO2Q9UK22 296 aaPredicted RBP13.49□□□□□ -0.25
SNHG20-202ENST00000434411 PCDHB6Q9Y5E3 794 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms