RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 C4orf32Q8N8J7 132 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 RPGRQ92834 1020 aaKnown RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 TUBB2BQ9BVA1 445 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 ZMYND12Q9H0C1 365 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 CD209Q9NNX6 404 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 INTS13Q9NVM9 706 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 BARHL2Q9NY43 387 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 MYH1P12882 1939 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 SYNRGQ9UMZ2 1314 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 A0A087X0B3 334 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 FOXN1O15353 648 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 SLU7O95391 586 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 GNA11P29992 359 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 MAP2K3P46734 347 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 TFAP4Q01664 338 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 FILIP1LQ4L180 1135 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 EARS2Q5JPH6 523 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 ZNF658Q5TYW1 1059 aaPredicted RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 PRR5LQ6MZQ0 368 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 TC2NQ8N9U0 490 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 NOC3LQ8WTT2 800 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 GRIP2Q9C0E4 1043 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 TFCP2L1Q9NZI6 479 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 ANKIB1Q9P2G1 1089 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 ADD3Q9UEY8 706 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 LIMA1Q9UHB6 759 aaKnown RBP8.38□□□□□ -1.07
COL17A1-204ENST00000433822 MAD2L2Q9UI95 211 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 RWDD2AQ9UIY3 292 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
COL17A1-204ENST00000433822 GREB1LQ9C091 1923 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC194A0A1B0GVG4 234 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 WTIPA6NIX2 430 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 USP27XA6NNY8 438 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 SPATA31C2B4DYI2 1134 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 STXBP3O00186 592 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 PRDM1O75626 825 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 TPM1P09493 284 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 TSPY3P0CV98 308 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 TSPY8P0CW00 308 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 GYS1P13807 737 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 ERVK-9P63128 1117 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 FAM193AP78312 1265 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 USP49Q70CQ1 688 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 SMAP1Q8IYB5 467 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 ANKRD20A12PQ8NF67 263 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 SH3RF3Q8TEJ3 882 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 DPF2Q92785 391 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 DHX58Q96C10 678 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 IQCDQ96DY2 449 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 EPSTI1Q96J88 318 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 MED15Q96RN5 788 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 BAG1Q99933 345 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 COA1Q9GZY4 146 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 DISC1Q9NRI5 854 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 SWAP70Q9UH65 585 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 DNAI1Q9UI46 699 aa8.37□□□□□ -1.07
COL17A1-204ENST00000433822 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL17A1-204ENST00000433822 KIF13BQ9NQT8 1826 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 VWA3AA6NCI4 1184 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 AKR1B15C9JRZ8 316 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-204ENST00000433822 H7C1D1 291 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SMIM22K7EJ46 135 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 NPHP1O15259 732 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 RHOBTB3O94955 611 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 F11P03951 625 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SERPINB2P05120 415 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SNHG28P0DPA3 235 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CYP2D6P10635 497 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
COL17A1-204ENST00000433822 RHBDL3P58872 404 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 FKBP1AP62942 108 aaKnown RBP8.36□□□□□ -1.07
COL17A1-204ENST00000433822 PAK1Q13153 545 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CLN3Q13286 438 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 FAM47AQ5JRC9 791 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CNNM4Q6P4Q7 775 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 TRIM65Q6PJ69 517 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 COL23A1Q86Y22 540 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CREBRFQ8IUR6 639 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 REXO1L1PQ8IX06 675 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SP8Q8IXZ3 490 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms