RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 STRCQ7RTU9 1775 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LYPLA2O95372 231 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LSM8O95777 96 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LDHAP00338 332 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CASP7P55210 303 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 RIPPLY1Q0D2K3 151 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 SCRN1Q12765 414 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ODR4Q5SWX8 454 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LRIG3Q6UXM1 1119 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 RIBC1Q8N443 379 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 KBTBD4Q9NVX7 518 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ATAD5Q96QE3 1844 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 NUMA1Q14980 2115 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 HSF2BPO75031 334 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TROAPQ12815 778 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PRRC2BQ5JSZ5 2229 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 BZW1Q7L1Q6 419 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 YTHDF3Q7Z739 585 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ANKRD23Q86SG2 305 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CKAP2LQ8IYA6 745 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TTC28Q96AY4 2481 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CNPY3Q9BT09 278 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF518BQ9C0D4 1074 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TRPV6Q9H1D0 765 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ST6GALNAC4Q9H4F1 302 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 UBN1Q9NPG3 1134 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 HSPA8P11142 646 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 IQCB1Q15051 598 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 DBN1Q16643 649 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 RASGRP2Q7LDG7 609 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PDILTQ8N807 584 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 SMC1BQ8NDV3 1235 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LY9Q9HBG7 655 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CBX8Q9HC52 389 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 F5P12259 2224 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 THSD7AQ9UPZ6 1657 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 SLC1A1P43005 524 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 KPNA2P52292 529 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TFDP1Q14186 410 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TBCCQ15814 346 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC82Q8N4S0 544 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TBCBQ99426 244 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PNMA3Q9UL41 463 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PSME4Q14997 1843 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 NTSR2O95665 410 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF18P17022 549 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF771Q7L3S4 317 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 SRRM1Q8IYB3 904 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TTC13Q8NBP0 860 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PIGBQ92521 554 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 IDI2Q9BXS1 227 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 STK39Q9UEW8 545 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PPP2R2CQ9Y2T4 447 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 GVINP1Q7Z2Y8 2422 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 XPOTO43592 962 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CYP3A4P08684 503 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 IGBP1P78318 339 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ICA1Q05084 483 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CHRNDQ07001 517 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ARID5BQ14865 1188 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 C16orf86Q6ZW13 317 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 SRGAP1Q7Z6B7 1085 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 ERBB2P04626 1255 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 FGFR2P21802 821 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TBC1D8BQ0IIM8 1120 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TATDN1Q6P1N9 297 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 TRAPPC11Q7Z392 1133 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 FBXO33Q7Z6M2 555 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 AFAP1L2Q8N4X5 818 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 OTUD7AQ8TE49 926 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 KCNN1Q92952 543 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 P2RX5Q93086 422 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 PHF20Q9BVI0 1012 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 DEFB129Q9H1M3 183 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 DNAJC25Q9H1X3 360 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 KLRG2A4D1S0 409 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 PHBP35232 272 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CUL4BQ13620 913 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 E2F5Q15329 346 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 JADE2Q9NQC1 790 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ADGRA3Q8IWK6 1321 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MYO18AQ92614 2054 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ZBED4O75132 1171 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 FAM13AO94988 1023 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ATP1A3P13637 1013 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 STAT1P42224 750 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CLCN2P51788 898 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 DMP1Q13316 513 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SPRYD3Q8NCJ5 442 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 USP28Q96RU2 1077 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 LGR6Q9HBX8 967 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SAMD15Q9P1V8 674 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 WDR35Q9P2L0 1181 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TFIP11Q9UBB9 837 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 RBBP6Q7Z6E9 1792 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MTSS1O43312 755 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms