RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 CREBRFQ8IUR6 639 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 DCPSQ96C86 337 aaKnown RBP16.94■□□□□ 0.3
SF1-209ENST00000433274 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 COL20A1Q9P218 1284 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 VAV3Q9UKW4 847 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 PVALEFA0A1B0GWK0 134 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 ADM5C9JUS6 153 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 USP2O75604 605 aaPredicted RBP16.93■□□□□ 0.3
SF1-209ENST00000433274 SKILP12757 684 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 SFPQP23246 707 aaKnown RBP eCLIP16.93■□□□□ 0.3
SF1-209ENST00000433274 CEP55Q53EZ4 464 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 CCDC150Q8NCX0 1101 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.93■□□□□ 0.35e-7■■□□□ 12.6
SF1-209ENST00000433274 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 PLA2G4BP0C869 781 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 CCZ1BP86790 482 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
SF1-209ENST00000433274 NR1I3Q14994 352 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 KIAA0895Q8NCT3 520 aa16.93■□□□□ 0.3
SF1-209ENST00000433274 MEIS1O00470 390 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 SLC26A4O43511 780 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
SF1-209ENST00000433274 LRCH2Q5VUJ6 765 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
SF1-209ENST00000433274 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 C12orf42Q96LP6 360 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 EML1O00423 815 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 TEX33O43247 280 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 OFD1O75665 1012 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 RPA1P27694 616 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
SF1-209ENST00000433274 GTPBP4Q9BZE4 634 aaKnown RBP16.92■□□□□ 0.3
SF1-209ENST00000433274 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
SF1-209ENST00000433274 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 CHMP2AO43633 222 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 ARP10275 920 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 KRT31Q15323 416 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 SPECC1LQ69YQ0 1117 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 TTI2Q6NXR4 508 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 DNAJC19Q96DA6 116 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 AFG3L2Q9Y4W6 797 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 PSMD10O75832 226 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 FDX1P10109 184 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 PSMC6P62333 389 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 VGLL4Q14135 290 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 TCP11X2Q5H9J9 407 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 SLC5A5Q92911 643 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 P2RX5Q93086 422 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 EIF2AK1Q9BQI3 630 aaKnown RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 ZNF577Q9BSK1 485 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 SRRTQ9BXP5 876 aaKnown RBP16.91■□□□□ 0.3
SF1-209ENST00000433274 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
SF1-209ENST00000433274 GAS7O60861 476 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 CCNE1P24864 410 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 RPS6P62753 249 aaKnown RBP16.9■□□□□ 0.3
SF1-209ENST00000433274 SETQ01105 290 aaPredicted RBP16.9■□□□□ 0.3
SF1-209ENST00000433274 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
SF1-209ENST00000433274 SPAG1Q07617 926 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 RAD51AP2Q09MP3 1159 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
SF1-209ENST00000433274 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
SF1-209ENST00000433274 RIPK3Q9Y572 518 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 SNCAIPQ9Y6H5 919 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 RPTORQ8N122 1335 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 BICDL2A1A5D9 508 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 DSG3P32926 999 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 PPP1R2P41236 205 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 GHRHRQ02643 423 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 COASYQ13057 564 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 PABPC4Q13310 644 aaKnown RBP eCLIP16.9■□□□□ 0.31e-9■□□□□ 8.7
SF1-209ENST00000433274 COG2Q14746 738 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 ANKRD40Q6AI12 368 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 IRF2BP1Q8IU81 584 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms