RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 REC8O95072 547 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 MBD4O95243 580 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 ALAS1P13196 640 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 RASA1P20936 1047 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 SNAP25P60880 206 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 CBX2Q14781 532 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 APPBP2Q92624 585 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 MSLNLQ96KJ4 702 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.522e-6■■□□□ 13.4
ATG4B-212ENST00000430617 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
ATG4B-212ENST00000430617 IGFLR1Q9H665 355 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
ATG4B-212ENST00000430617 M0R2C6 588 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 CSPG5O95196 566 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 EYA4O95677 639 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 ADAM15Q13444 863 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 CTR9Q6PD62 1173 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 RMDN1Q96DB5 314 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
ATG4B-212ENST00000430617 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
ATG4B-212ENST00000430617 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 SPTBN2O15020 2390 aa11.81□□□□□ -0.52
ATG4B-212ENST00000430617 DOCK5Q9H7D0 1870 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 KPNA6O60684 536 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 PARNO95453 639 aaKnown RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 AMHP03971 560 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 NSMFQ6X4W1 530 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 SESTD1Q86VW0 696 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 KAT2BQ92831 832 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 NKD2Q969F2 451 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
ATG4B-212ENST00000430617 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 C22orf23Q9BZE7 217 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 ANO2Q9NQ90 1003 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 CLEC1BQ9P126 229 aa11.8□□□□□ -0.52
ATG4B-212ENST00000430617 TTC3P53804 2025 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 FOXP2O15409 715 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 UPP2O95045 317 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 BMP3P12645 472 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 TKFCQ3LXA3 575 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 TMEM105Q8N8V8 129 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 MKL1Q969V6 931 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 YME1L1Q96TA2 773 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
ATG4B-212ENST00000430617 ARIH2O95376 493 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 CTNNB1P35222 781 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 NDUFV1P49821 464 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 NUBP1P53384 320 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-212ENST00000430617 PTH1RQ03431 593 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 CAMK1Q14012 370 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-212ENST00000430617 HIC1Q14526 733 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 BRDTQ58F21 947 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-212ENST00000430617 DGLUCYQ7Z3D6 616 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 RPGRIP1Q96KN7 1286 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
ATG4B-212ENST00000430617 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
ATG4B-212ENST00000430617 USP24Q9UPU5 2620 aa11.77□□□□□ -0.52
ATG4B-212ENST00000430617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-212ENST00000430617 C5orf67F2Z3F1 127 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 FDX1P10109 184 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 ICAM3P32942 547 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 HSPA4P34932 840 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 STAT2P52630 851 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 ADGRD2Q7Z7M1 963 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 GMCL1P1Q8NEA9 526 aa11.77□□□□□ -0.53
ATG4B-212ENST00000430617 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms