RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
LINC00839-202ENST00000429940 RGL2O15211 777 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 ERCC3P19447 782 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 RASA1P20936 1047 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 TNFRSF8P28908 595 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 GNGT1P63211 74 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 ATP2B2Q01814 1243 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 RASSF7Q02833 373 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 TLR10Q9BXR5 811 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 EHD4Q9H223 541 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 BIN2Q9UBW5 565 aaPredicted RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 A0A087WUV0 522 aaPredicted RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 EBAG9O00559 213 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 EIF3HO15372 352 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 BUB1O43683 1085 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 SLC1A4P43007 532 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 NAP1L1P55209 391 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 BCAS4Q8TDM0 211 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
LINC00839-202ENST00000429940 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
LINC00839-202ENST00000429940 GRIN2DO15399 1336 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 BAG3O95817 575 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 MMP10P09238 476 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 ORC2Q13416 577 aaPredicted RBP16.6■□□□□ 0.25
LINC00839-202ENST00000429940 CALCRLQ16602 461 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 ASTE1Q2TB18 679 aaPredicted RBP16.6■□□□□ 0.25
LINC00839-202ENST00000429940 KLHDC7AQ5VTJ3 777 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 USP17L2Q6R6M4 530 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 LRRC55Q6ZSA7 311 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 MYH10P35580 1976 aa16.6■□□□□ 0.25
LINC00839-202ENST00000429940 TNRC6CQ9HCJ0 1690 aaKnown RBP16.6■□□□□ 0.25
LINC00839-202ENST00000429940 SSU72P8A0A1W2PR75 194 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 CPP00450 1065 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 GLE1Q53GS7 698 aaKnown RBP16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TTMPQ5BVD1 217 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 RNF10Q8N5U6 811 aaKnown RBP16.59■□□□□ 0.25
LINC00839-202ENST00000429940 ARL8AQ96BM9 186 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TSG101Q99816 390 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 RABEP2Q9H5N1 569 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
LINC00839-202ENST00000429940 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TMEM266Q2M3C6 531 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 TTC19Q6DKK2 380 aaPredicted RBP16.59■□□□□ 0.25
LINC00839-202ENST00000429940 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 PIGSQ96S52 555 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
LINC00839-202ENST00000429940 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.25
LINC00839-202ENST00000429940 GSTO1P78417 241 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 NNTQ13423 1086 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 HGSNATQ68CP4 663 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 IFT20Q8IY31 132 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 NLGN1Q8N2Q7 840 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 WDR66Q8TBY9 1149 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 ZIM3Q96PE6 472 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 EYA3Q99504 573 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 ZNF287Q9HBT7 754 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 FAM169AQ9Y6X4 670 aa16.58■□□□□ 0.25
LINC00839-202ENST00000429940 KCNMA1Q12791 1236 aa16.58■□□□□ 0.24
LINC00839-202ENST00000429940 LRRC41Q15345 812 aa16.58■□□□□ 0.24
LINC00839-202ENST00000429940 SLC9C1Q4G0N8 1177 aa16.58■□□□□ 0.24
LINC00839-202ENST00000429940 RAD54LQ92698 747 aa16.58■□□□□ 0.24
LINC00839-202ENST00000429940 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
LINC00839-202ENST00000429940 IRS2Q9Y4H2 1338 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 POTEMA6NI47 508 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 SKOR1P84550 965 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 ICE2Q659A1 982 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
LINC00839-202ENST00000429940 DDX12PQ92771 950 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 RAB34Q9BZG1 259 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 RIC8AQ9NPQ8 531 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 RNF14Q9UBS8 474 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 SLC37A4O43826 429 aa16.57■□□□□ 0.24
LINC00839-202ENST00000429940 GLI1P08151 1106 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms