RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 ARHGEF18Q6ZSZ5 1173 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.87□□□□□ -0.19
LDB3-205ENST00000429277 PI4KBQ9UBF8 816 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 AKT3Q9Y243 479 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 CASP14P31944 242 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 LIFRP42702 1097 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 SESTD1Q86VW0 696 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 ZBTB9Q96C00 473 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 INTS9Q9NV88 658 aaKnown RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 SGK1O00141 431 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 MMP1P03956 469 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 RASSF7Q02833 373 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 GPIHBP1Q8IV16 184 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 NSUN7Q8NE18 718 aaKnown RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 ENOX1Q8TC92 643 aaKnown RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 INO80B-WBP1J3KQ70 363 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 PSAPP07602 524 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 ZSCAN20P17040 1043 aaPredicted RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 SLFN12LQ6IEE8 588 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 INO80BQ9C086 356 aaPredicted RBP13.87□□□□□ -0.19
LDB3-205ENST00000429277 DNAJC8O75937 253 aaPredicted RBP13.86□□□□□ -0.19
LDB3-205ENST00000429277 CPP00450 1065 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 CCNE1P24864 410 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
LDB3-205ENST00000429277 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ZBED6P86452 979 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ANKRD20A4Q4UJ75 823 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ANKRD20A8PQ5CZ79 823 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ANKRD20A2Q5SQ80 823 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ANKRD20A1Q5TYW2 823 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 EFHD1Q9BUP0 239 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 LRFN2Q9ULH4 789 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 SERPINB2P05120 415 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 KAZNQ674X7 775 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 CCDC197Q8NCU1 140 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 PARVGQ9HBI0 331 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 IGBP1P78318 339 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
LDB3-205ENST00000429277 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 TTBK2Q6IQ55 1244 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 ARHGEF25Q86VW2 580 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 TBCKQ8TEA7 893 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 RCOR1Q9UKL0 485 aa13.86□□□□□ -0.19
LDB3-205ENST00000429277 PPARGP37231 505 aaPredicted RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 IQCB1Q15051 598 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 FAM149B1Q96BN6 582 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 DRC3Q9H069 523 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 CYP21A2P08686 494 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 RABEP2Q9H5N1 569 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 LDHAP00338 332 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 DIS3Q9Y2L1 958 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 MSH2P43246 934 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 EIF3BP55884 814 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 RAPH1Q70E73 1250 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 CCDC124Q96CT7 223 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 SLC8A2Q9UPR5 921 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 IPO5O00410 1097 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 SERPING1P05155 500 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 MXI1P50539 228 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
LDB3-205ENST00000429277 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
LDB3-205ENST00000429277 GCC2Q8IWJ2 1684 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 DISP1Q96F81 1524 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 IFRD2Q12894 506 aaPredicted RBP13.84□□□□□ -0.19
LDB3-205ENST00000429277 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 CUL4AQ13619 759 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 TMTC3Q6ZXV5 915 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 SKA2Q8WVK7 121 aaPredicted RBP13.84□□□□□ -0.19
LDB3-205ENST00000429277 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 SCINQ9Y6U3 715 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 KRT1P04264 644 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 ADORA1P30542 326 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 THOC5Q13769 683 aaKnown RBP13.84□□□□□ -0.19
LDB3-205ENST00000429277 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
LDB3-205ENST00000429277 DGKHQ86XP1 1220 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms